RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 SLC25A28Q96A46 364 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 CMBLQ96DG6 245 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 DCBLD2Q96PD2 775 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 APMAPQ9HDC9 416 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 UBQLN4Q9NRR5 601 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 ETV7Q9Y603 341 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 CABIN1Q9Y6J0 2220 aa9.05□□□□□ -0.96
LIG3-201ENST00000262327 TRBV5-7A0A0A0MS05 114 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 LOC101059948A0A1B0GTJ6 334 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 EIF1AYO14602 144 aaKnown RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 XKRYO14609 159 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 SNAPINO95295 136 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 CLPSP04118 112 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 THEGLP0DJG4 465 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 C4BPBP20851 252 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 SLC25A1P53007 311 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 MRPS10P82664 201 aaKnown RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 DHODHQ02127 395 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 ZNF117Q03924 483 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 NR0B2Q15466 257 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 DMRTC1Q5HYR2 192 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 RTN4RL2Q86UN3 420 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 LINC00346Q8IVM7 164 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 GABRG1Q8N1C3 465 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 ARHGEF39Q8N4T4 335 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 EID2Q8N6I1 236 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 ZNF565Q8N9K5 539 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 ACBD4Q8NC06 268 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 OR1J2Q8NGS2 313 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 METTL21AQ8WXB1 218 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 FAM46BQ96A09 425 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 TGM7Q96PF1 710 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 GPX7Q96SL4 187 aaPredicted RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 WDR13Q9H1Z4 485 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 TMEM185BQ9H7F4 350 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 ZNF275Q9NSD4 429 aaPredicted RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 MED11Q9P086 117 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 PLCL2Q9UPR0 1127 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 SESN1Q9Y6P5 492 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 TMEM235A6NFC5 223 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 OR6C65A6NJZ3 312 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 TMEM212A6NML5 194 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 RAB3DO95716 219 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 CTLA4P16410 223 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 IL11P20809 199 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 CXCR1P25024 350 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 CXCL12P48061 93 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 EPHA4P54764 986 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 PSMD4P55036 377 aaKnown RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 ADAM8P78325 824 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 ZXDAP98168 799 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 EEF1A1P5Q5VTE0 462 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 C16orf47Q6ZP98 133 aaPredicted RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 KRT77Q7Z794 578 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 FAM219AQ8IW50 185 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 SLC43A2Q8N370 569 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 OTOSQ8NHW6 89 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 GPR119Q8TDV5 335 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 NARS2Q96I59 477 aaKnown RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 ZNF75AQ96N20 296 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 DHCR7Q9UBM7 475 aaKnown RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 MRPS18BQ9Y676 258 aaKnown RBP9.04□□□□□ -0.96
LIG3-201ENST00000262327 UNC13CQ8NB66 2214 aa9.04□□□□□ -0.96
LIG3-201ENST00000262327 METTL12A8MUP2 240 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 CSF1P09603 554 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 OR4E1P0C645 316 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 PNMTP11086 282 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 HLA-DOBP13765 273 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 EIF1AXP47813 144 aaKnown RBP9.03□□□□□ -0.96
LIG3-201ENST00000262327 AKR1C2P52895 323 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 DEFA5Q01523 94 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 AKR1C1Q04828 323 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 FUT7Q11130 342 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 TAF13Q15543 124 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 ACKR1Q16570 336 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 PRTGQ2VWP7 1150 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 SHISA6Q6ZSJ9 500 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 TTLL10Q6ZVT0 673 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 ZNF546Q86UE3 836 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 CLEC1AQ8NC01 280 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 OR6N1Q8NGY5 312 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 MCHR2Q969V1 340 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 TPSD1Q9BZJ3 242 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 GSN-AS1Q9NRJ2 163 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 MRPL22Q9NWU5 206 aaKnown RBP9.03□□□□□ -0.96
LIG3-201ENST00000262327 DHDHQ9UQ10 334 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 VPS13AQ96RL7 3174 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 TRAV14DV4A0A0A6YYC5 116 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 TMEM82A0PJX8 343 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 H0YIG0 161 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 DNASE2O00115 360 aaPredicted RBP9.03□□□□□ -0.96
LIG3-201ENST00000262327 CD27P26842 260 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 HOXA6P31267 233 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 NR0B1P51843 470 aaKnown RBP9.03□□□□□ -0.96
LIG3-201ENST00000262327 SLC17A1Q14916 467 aa9.03□□□□□ -0.96
LIG3-201ENST00000262327 MANEAQ5SRI9 462 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms