RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SLC36A2Q495M3 483 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 TIMM23BQ5SRD1 257 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 CFAP77Q6ZQR2 320 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 DCXRQ7Z4W1 244 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR10H4Q8NGA5 316 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 ST7LQ8TDW4 575 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 COPS4Q9BT78 406 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 KCNN2Q9H2S1 579 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 DUSP21Q9H596 190 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 FGF20Q9NP95 211 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 TPRKBQ9Y3C4 175 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 PRR14LQ5THK1 2151 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 DOPEY1Q5JWR5 2465 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 A0A1W2PQL4 384 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 MAGEA13PA6NCF6 341 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 PRR32B1ATL7 298 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 TMCC2O75069 709 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 UBL3O95164 117 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 IGHA1P01876 353 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR2T7P0C7T2 308 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 HIST1H3AP68431 136 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 PSG4Q00888 419 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 SNTB1Q13884 538 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 EIF2B1Q14232 305 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 TAB1Q15750 504 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 HIST2H3PS2Q5TEC6 136 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 HIST2H3AQ71DI3 136 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 SSX6Q7RTT6 188 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 SYT9Q86SS6 491 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 CCDC36Q8IYA8 594 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR10S1Q8NGN2 331 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR2AJ1Q8NGZ0 328 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR2T27Q8NH04 317 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 THEM6Q8WUY1 208 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 NANOS1Q8WY41 292 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 LRRC46Q96FV0 321 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 ABHD6Q9BV23 337 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 TTTY10Q9BZA0 68 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR2H1Q9GZK4 316 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 RNF121Q9H920 327 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 CCNB1IP1Q9NPC3 277 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 NPDC1Q9NQX5 325 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 SLC25A15Q9Y619 301 aa13.79□□□□□ -0.2
CCDC90B-201ENST00000260054 IRGMA1A4Y4 181 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 LYNP07948 512 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 C21orf33P30042 268 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 CHN2P52757 468 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 PCBD1P61457 104 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 RAB1AP62820 205 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF85Q03923 595 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 SCRN3Q0VDG4 424 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 GSG1Q2KHT4 349 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 CCDC92Q53HC0 331 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 MDP1Q86V88 176 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF454Q8N9F8 522 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 GJC3Q8NFK1 279 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 AKR7LQ8NHP1 331 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 TMEM80Q96HE8 168 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 NR1H4Q96RI1 486 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 WACQ9BTA9 647 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 YTHDF1Q9BYJ9 559 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 FAM192AQ9GZU8 254 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 WNT5BQ9H1J7 359 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 C1orf198Q9H425 327 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 OBP2BQ9NPH6 170 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 PNRC2Q9NPJ4 139 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 ERVK-18Q9QC07 812 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 LAMP5Q9UJQ1 280 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 BLOC1S6Q9UL45 172 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 DIMT1Q9UNQ2 313 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 PCDHGB1Q9Y5G3 927 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 TIMM10BQ9Y5J6 103 aa13.78□□□□□ -0.2
CCDC90B-201ENST00000260054 CLEC18AA5D8T8 446 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 RAB36O95755 333 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 CDK1P06493 297 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 DCKP27707 260 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 ACTC1P68032 377 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 ACTA1P68133 377 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 SORDQ00796 357 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 PABPC1L2AQ5JQF8 200 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF774Q6NX45 483 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 CLEC18BQ6UXF7 455 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 DPPA2Q7Z7J5 298 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 STX19Q8N4C7 294 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 ACBD7Q8N6N7 88 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 CLEC18CQ8NCF0 446 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 IPCEF1Q8WWN9 437 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF75AQ96N20 296 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 SIGLEC11Q96RL6 698 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 MNTQ99583 582 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 USB1Q9BQ65 265 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 JAM3Q9BX67 310 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 C1QTNF6Q9BXI9 259 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 PLEK2Q9NYT0 353 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 TMEM14AQ9Y6G1 99 aa13.77□□□□□ -0.21
CCDC90B-201ENST00000260054 HCFC1P51610 2035 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms