RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 CD96P40200 585 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 SSBP1Q04837 148 aaKnown RBP12.04□□□□□ -0.48
H3F3B-201ENST00000254810 ZNF542PQ5EBM4 170 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 TEX30Q5JUR7 227 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 FDX2Q6P4F2 183 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 PAPD4Q6PIY7 484 aaKnown RBP12.04□□□□□ -0.48
H3F3B-201ENST00000254810 MARCH3Q86UD3 253 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 OR5AP2Q8NGF4 316 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 OR4D6Q8NGJ1 314 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 RNF128Q8TEB7 428 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 PAQR8Q8TEZ7 354 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 CASTOR1Q8WTX7 329 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 ROBO4Q8WZ75 1007 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 FAM131CQ96AQ9 280 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 C8orf44Q96CB5 159 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 COA4Q9NYJ1 87 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 NDRG3Q9UGV2 375 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 RHBDD3Q9Y3P4 386 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 LINC01553A4QN01 128 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 EEF1E1-BLOC1S5C9J1V9 151 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 H7C2Y5 167 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 OR2T1O43869 369 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 PNMTP11086 282 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 NPBWR1P48145 328 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 CXADRP78310 365 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 INSM1Q01101 510 aaPredicted RBP12.04□□□□□ -0.48
H3F3B-201ENST00000254810 ZNF528Q3MIS6 628 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 PRAMEF17Q5VTA0 474 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 HAGHLQ6PII5 290 aaPredicted RBP12.04□□□□□ -0.48
H3F3B-201ENST00000254810 SLC25A42Q86VD7 318 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 OR4A4PQ8NGN8 299 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
H3F3B-201ENST00000254810 SELENOIQ9C0D9 397 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 COMMD9Q9P000 198 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 MLXQ9UH92 298 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 KIF26BQ2KJY2 2108 aa12.04□□□□□ -0.48
H3F3B-201ENST00000254810 PCNX3Q9H6A9 2034 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 A0A1B0GW55 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 C9orf170A2RU37 121 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 OR2AT4A6NND4 320 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 PGAM2P15259 253 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 CTLA4P16410 223 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 HOXA1P49639 335 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-201ENST00000254810 PNLIPRP2P54317 469 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 SKP1P63208 163 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 SCRN3Q0VDG4 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 ELOCQ15369 112 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 CDNFQ49AH0 187 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 RAB12Q6IQ22 244 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 LYG2Q86SG7 212 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 FJX1Q86VR8 437 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 ZNF679Q8IYX0 411 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 PRR22Q8IZ63 422 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 JAGN1Q8N5M9 183 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 PHYHIPLQ96FC7 376 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 SLC25A44Q96H78 314 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DGAT2Q96PD7 388 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 IL23AQ9NPF7 189 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 TMEM184BQ9Y519 407 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-201ENST00000254810 FREM3P0C091 2139 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 A0A1W2PQF6 199 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 SULT1C2O00338 296 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 FGF16O43320 207 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 SLC16A7O60669 478 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.03□□□□□ -0.485e-8■■■□□ 19.1
H3F3B-201ENST00000254810 ZNF813Q6ZN06 617 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 ADGRE4PQ86SQ3 457 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 C2CD4CQ8TF44 421 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 NUDCD2Q8WVJ2 157 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 MKL2Q9ULH7 1088 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 LRP12Q9Y561 859 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 TMEM14AQ9Y6G1 99 aa12.03□□□□□ -0.48
H3F3B-201ENST00000254810 SOX1O00570 391 aaPredicted RBP12.02□□□□□ -0.48
H3F3B-201ENST00000254810 NFYBP25208 207 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 FUT7Q11130 342 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 EMC4Q5J8M3 183 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 PARGQ86W56 976 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 CATSPERDQ86XM0 798 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 ZFP82Q8N141 532 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 CMSS1Q9BQ75 279 aaKnown RBP12.02□□□□□ -0.48
H3F3B-201ENST00000254810 NUDT9Q9BW91 350 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 PRTFDC1Q9NRG1 225 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 PRR13Q9NZ81 148 aa12.02□□□□□ -0.48
H3F3B-201ENST00000254810 IL2RAP01589 272 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 BGLAPP02818 100 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 KCNJ3P48549 501 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 PRKXP51817 358 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 TOMM20Q15388 145 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 UQCC3Q6UW78 93 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
H3F3B-201ENST00000254810 SVBPQ8N300 66 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms