RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GLAP06280 429 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 OPCMLQ14982 345 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF74Q16587 644 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 PLXDC2Q6UX71 529 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 LHFPL2Q6ZUX7 228 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 H1FXQ92522 213 aaKnown RBP17.26■□□□□ 0.35
PTPRE-201ENST00000254667 SERTAD4Q9NUC0 356 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 PRR35P0CG20 571 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 MC2RQ01718 297 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 TLE4Q04727 773 aa17.26■□□□□ 0.35
PTPRE-201ENST00000254667 ATPAF1Q5TC12 328 aaPredicted RBP17.26■□□□□ 0.35
PTPRE-201ENST00000254667 RFX2P48378 723 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 LGALS4P56470 323 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF266Q14584 549 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 RBMS3Q6XE24 437 aaKnown RBP17.25■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF683Q8IZ20 524 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 HAS2Q92819 552 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 SPACA9Q96E40 222 aaPredicted RBP17.25■□□□□ 0.35
PTPRE-201ENST00000254667 SPNS1Q9H2V7 528 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 ANKRD34BA5PLL1 514 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 MKRN2OSH3BPM6 223 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 TNFSF12O43508 249 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 CXCL13O43927 109 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 TMEM127O75204 238 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 FBXO24O75426 580 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 DYRK1AQ13627 763 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 BEX5Q5H9J7 111 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 HRH4Q9H3N8 390 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 GPR173Q9NS66 373 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 SLC2A10O95528 541 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 CLDN1O95832 211 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 EMDP50402 254 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 IAH1Q2TAA2 248 aaPredicted RBP17.25■□□□□ 0.35
PTPRE-201ENST00000254667 TFAP2EQ6VUC0 442 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 DAZAP1Q96EP5 407 aaKnown RBP17.25■□□□□ 0.35
PTPRE-201ENST00000254667 PRDM7Q9NQW5 492 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 ADAMTS7Q9UKP4 1686 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF674Q2M3X9 581 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 HEPHL1Q6MZM0 1159 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 LYSMD2Q8IV50 215 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 R4GMQ9 66 aa17.25■□□□□ 0.35
PTPRE-201ENST00000254667 CCDC163A0A0D9SF12 145 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 SMIM18P0DKX4 95 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 NANPQ8TBE9 248 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 OR2A14Q96R47 310 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 FBXL2Q9UKC9 423 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 EDARQ9UNE0 448 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 IGFBP1P08833 259 aaPredicted RBP17.24■□□□□ 0.35
PTPRE-201ENST00000254667 SHEQ5VZ18 495 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 OR52W1Q6IF63 320 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 OR6K3Q8NGY3 331 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF707Q96C28 371 aaPredicted RBP17.24■□□□□ 0.35
PTPRE-201ENST00000254667 ALG14Q96F25 216 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 SEC22AQ96IW7 307 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 EDN3P14138 238 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 NKX6-1P78426 367 aaPredicted RBP17.24■□□□□ 0.35
PTPRE-201ENST00000254667 AKR1C1Q04828 323 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 SHBQ15464 509 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 OR10J5Q8NHC4 309 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 TCTEX1D2Q8WW35 142 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 FRZBQ92765 325 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 DVL3Q92997 716 aaPredicted RBP17.24■□□□□ 0.35
PTPRE-201ENST00000254667 SMIM19Q96E16 107 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 ATF6BQ99941 703 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 SERTM1A2A2V5 107 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 GUSBP08236 651 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 CLDN15P56746 228 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 CD276Q5ZPR3 534 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 ADGRF3Q8IZF5 1079 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 BIN3Q9NQY0 253 aa17.24■□□□□ 0.35
PTPRE-201ENST00000254667 ZC3H12DA2A288 527 aaKnown RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 GMDSO60547 372 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 IL11RAQ14626 422 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 EGFL6Q8IUX8 553 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 SEH1LQ96EE3 360 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 TRIB1Q96RU8 372 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 FGF20Q9NP95 211 aaPredicted RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 LAMB2P55268 1798 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 AIPO00170 330 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 FADS1O60427 444 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 BHLHE23Q8NDY6 225 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 OR52N5Q8NH56 324 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 CRISPLD2Q9H0B8 497 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 CRYAAP02489 173 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 DSCR4P56555 118 aaPredicted RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF573Q86YE8 665 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 EXD3Q8N9H8 876 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 GFOD1Q9NXC2 390 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 SLC5A6Q9Y289 635 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 MYO5AQ9Y4I1 1855 aaKnown RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 A0A1B0GTL3 188 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 GP2P55259 537 aaKnown RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 CALHM3Q86XJ0 350 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 PLPP5Q8NEB5 264 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 ARHGDIGQ99819 225 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 ZMAT3Q9HA38 289 aaKnown RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 EXO1Q9UQ84 846 aaKnown RBP17.23■□□□□ 0.35
PTPRE-201ENST00000254667 A0A0B4J2A0 478 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 A0A0U1RQK1 487 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms