RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ZNF786Q8N393 782 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 AQP11Q8NBQ7 271 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 UBASH3BQ8TF42 649 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 POP5Q969H6 163 aaKnown RBP19.65■□□□□ 0.74
LSM4-201ENST00000252816 CHID1Q9BWS9 393 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 PLA2G12AQ9BZM1 189 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 BPESC1Q9GZL8 116 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 REEP1Q9H902 201 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 EIF3KQ9UBQ5 218 aaKnown RBP19.65■□□□□ 0.74
LSM4-201ENST00000252816 B9D1Q9UPM9 204 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 IGHV4-61A0A0C4DH41 118 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 DOK2O60496 412 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 ICMTO60725 284 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 NGFP01138 241 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 HPXP02790 462 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 GAAP10253 952 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 CRABP1P29762 137 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 SELENOVP59797 346 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 AQP6Q13520 282 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 KCNMB1Q16558 191 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 MEP1BQ16820 701 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 NKPD1Q17RQ9 610 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 SLC35F1Q5T1Q4 408 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 VASH1Q7L8A9 365 aaPredicted RBP19.64■□□□□ 0.73
LSM4-201ENST00000252816 SDR9C7Q8NEX9 313 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 OR8D4Q8NGM9 314 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 ABHD4Q8TB40 342 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 CANT1Q8WVQ1 401 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 MARS2Q96GW9 593 aaKnown RBP19.64■□□□□ 0.73
LSM4-201ENST00000252816 SNX18Q96RF0 628 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 SRA1Q9HD15 236 aaKnown RBP19.64■□□□□ 0.73
LSM4-201ENST00000252816 IL20Q9NYY1 176 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 ASH2LQ9UBL3 628 aa19.64■□□□□ 0.73
LSM4-201ENST00000252816 YLPM1P49750 1951 aaKnown RBP19.64■□□□□ 0.73
LSM4-201ENST00000252816 OR6C68A6NDL8 312 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 AQP12BA6NM10 295 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 BHLHE40O14503 412 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 SGCEO43556 437 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 IDH3BO43837 385 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 NCR1O76036 304 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 RENP00797 406 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 COX5BP10606 129 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 GIFP27352 417 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 NOS3P29474 1203 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 MPV17P39210 176 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 HTR5AP47898 357 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 CENPAP49450 140 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 PPP2R2BQ00005 443 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 MICAQ29983 383 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 ELFN2Q5R3F8 820 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 DNM1P34Q6PK57 102 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 RASSF6Q6ZTQ3 369 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.63■□□□□ 0.73
LSM4-201ENST00000252816 AQP12AQ8IXF9 295 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 NPEPL1Q8NDH3 523 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 SLC25A40Q8TBP6 338 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 GTF3AQ92664 365 aaKnown RBP19.63■□□□□ 0.73
LSM4-201ENST00000252816 C4orf45Q96LM5 186 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 OR2J1Q9GZK6 312 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 FN3KQ9H479 309 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 RPRD1BQ9NQG5 326 aaKnown RBP19.63■□□□□ 0.73
LSM4-201ENST00000252816 SLCO1C1Q9NYB5 712 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 NDRG4Q9ULP0 352 aaKnown RBP19.63■□□□□ 0.73
LSM4-201ENST00000252816 JMJD1CQ15652 2540 aa19.63■□□□□ 0.73
LSM4-201ENST00000252816 IGHV3-13P01766 116 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 PPP1CBP62140 327 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 GLO1Q04760 184 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 CCDC92Q53HC0 331 aaPredicted RBP19.62■□□□□ 0.73
LSM4-201ENST00000252816 RPL13AP3Q6NVV1 102 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 ZBTB46Q86UZ6 589 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 OR52L1Q8NGH7 329 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 OR52E2Q8NGJ4 325 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 IPCEF1Q8WWN9 437 aaPredicted RBP19.62■□□□□ 0.73
LSM4-201ENST00000252816 SLC7A6Q92536 515 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 RACGAP1Q9H0H5 632 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 HINT3Q9NQE9 182 aaKnown RBP19.62■□□□□ 0.73
LSM4-201ENST00000252816 YAE1D1Q9NRH1 226 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 PLEK2Q9NYT0 353 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 LHFPL6Q9Y693 200 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 ABCA2Q9BZC7 2435 aa19.62■□□□□ 0.73
LSM4-201ENST00000252816 DHRS12A0PJE2 317 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 OR6C6A6NF89 314 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 C17orf100A8MU93 164 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 RER1O15258 196 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 TLX2O43763 284 aaPredicted RBP19.61■□□□□ 0.73
LSM4-201ENST00000252816 IGHV4-31P0DP07 118 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 COL8A2P25067 703 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 MAGEB1P43366 347 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.61■□□□□ 0.73
LSM4-201ENST00000252816 RIN1Q13671 783 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 KRTAP21-3Q3LHN1 58 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 ZNF718Q3SXZ3 478 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 ZNF540Q8NDQ6 660 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 SLC26A10Q8NG04 563 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 KLF14Q8TD94 323 aaPredicted RBP19.61■□□□□ 0.73
LSM4-201ENST00000252816 DDOQ99489 341 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 DGCR6LQ9BY27 220 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 GPR160Q9UJ42 338 aa19.61■□□□□ 0.73
LSM4-201ENST00000252816 DNAJC8O75937 253 aaPredicted RBP19.6■□□□□ 0.73
LSM4-201ENST00000252816 ABHD16AO95870 558 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms