RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 PSMD9O00233 223 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 FARS2O95363 451 aaKnown RBP17.55■□□□□ 0.4
SNRPA-201ENST00000243563 CCDC159P0C7I6 412 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 ALOX5APP20292 161 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 C21orf33P30042 268 aaPredicted RBP17.55■□□□□ 0.4
SNRPA-201ENST00000243563 ST3GAL4Q11206 333 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 RAB40BQ12829 278 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 AQP6Q13520 282 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 ZNF774Q6NX45 483 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 ZNF584Q8IVC4 421 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 C17orf78Q8N4C9 275 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 ZNF540Q8NDQ6 660 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 STEAP2Q8NFT2 490 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 MS4A3Q96HJ5 214 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 WFIKKN1Q96NZ8 548 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 SIGLEC11Q96RL6 698 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 ABHD6Q9BV23 337 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 HDHD5Q9BXW7 423 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 OR2H1Q9GZK4 316 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 DUSP21Q9H596 190 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 NPAP1Q9NZP6 1156 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 DOPEY1Q5JWR5 2465 aa17.55■□□□□ 0.4
SNRPA-201ENST00000243563 SNTNA6NMZ2 147 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 IGHA1P01876 353 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 PIPP12273 146 aaPredicted RBP17.54■□□□□ 0.4
SNRPA-201ENST00000243563 ATP6V1E1P36543 226 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 CDH15P55291 814 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 POU4F2Q12837 409 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 PABPC1L2AQ5JQF8 200 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 RBM48Q5RL73 367 aaKnown RBP17.54■□□□□ 0.4
SNRPA-201ENST00000243563 ALKBH2Q6NS38 261 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 CPEB3Q8NE35 698 aaKnown RBP17.54■□□□□ 0.4
SNRPA-201ENST00000243563 LINC01560Q8TB33 94 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 ZC3HAV1LQ96H79 300 aaKnown RBP17.54■□□□□ 0.4
SNRPA-201ENST00000243563 COPS4Q9BT78 406 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 CDADC1Q9BWV3 514 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 YIPF3Q9GZM5 350 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 ANOS1P23352 680 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 ETV1P50549 477 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 UBE2NP61088 152 aaKnown RBP17.54■□□□□ 0.4
SNRPA-201ENST00000243563 RAB1AP62820 205 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 TIMM23BQ5SRD1 257 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 THEM6Q8WUY1 208 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 SLC7A6Q92536 515 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 CNOT2Q9NZN8 540 aaKnown RBP17.54■□□□□ 0.4
SNRPA-201ENST00000243563 CLEC2DQ9UHP7 191 aa17.54■□□□□ 0.4
SNRPA-201ENST00000243563 EFCAB10A6NFE3 127 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 LIMS3P0CW19 117 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 LIMS4P0CW20 117 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 RAB39AQ14964 217 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 GSG1Q2KHT4 349 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 SLC36A2Q495M3 483 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 KLHL22Q53GT1 634 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 VASH1Q7L8A9 365 aaPredicted RBP17.53■□□□□ 0.4
SNRPA-201ENST00000243563 LHFPL3Q86UP9 236 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 SLAMF6Q96DU3 332 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 RNF121Q9H920 327 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 CCNB1IP1Q9NPC3 277 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 LAMP5Q9UJQ1 280 aa17.53■□□□□ 0.4
SNRPA-201ENST00000243563 DIMT1Q9UNQ2 313 aaKnown RBP17.53■□□□□ 0.4
SNRPA-201ENST00000243563 UBL3O95164 117 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 RAB36O95755 333 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 MT-ND2P03891 347 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 CDK1P06493 297 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 OR2T7P0C7T2 308 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 CHN2P52757 468 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 PPA1Q15181 289 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 RSPO1Q2MKA7 263 aaPredicted RBP17.52■□□□□ 0.4
SNRPA-201ENST00000243563 LRRN1Q6UXK5 716 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 OR2AJ1Q8NGZ0 328 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 OR2T27Q8NH04 317 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 SSC4DQ8WTU2 575 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 TMEM80Q96HE8 168 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 ERVK13-1Q9NX77 482 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 SCN3BQ9NY72 215 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 SLCO1C1Q9NYB5 712 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 AMDHD2Q9Y303 409 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 TIMM10BQ9Y5J6 103 aa17.52■□□□□ 0.4
SNRPA-201ENST00000243563 SGCEO43556 437 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 SYNGR3O43761 229 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 DOK2O60496 412 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 FADS2O95864 444 aaKnown RBP17.51■□□□□ 0.39
SNRPA-201ENST00000243563 LYNP07948 512 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 CCL2P13500 99 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF14P17017 642 aaPredicted RBP17.51■□□□□ 0.39
SNRPA-201ENST00000243563 APEX1P27695 318 aaKnown RBP17.51■□□□□ 0.39
SNRPA-201ENST00000243563 CSNK2BP67870 215 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 HGFACQ04756 655 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF684Q5T5D7 378 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 PLEKHG7Q6ZR37 379 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 SYT9Q86SS6 491 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 C1orf198Q9H425 327 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 PLEK2Q9NYT0 353 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 FBXL3Q9UKT7 428 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 TPRKBQ9Y3C4 175 aa17.51■□□□□ 0.39
SNRPA-201ENST00000243563 LOC100509620A0A075B734 347 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 DAPL1A0PJW8 107 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 TRIM64A6NGJ6 449 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF670-ZNF695F2Z2N8 137 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 DBHP09172 617 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms