RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 MEMO1Q9Y316 297 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 OTOL1A6NHN0 477 aaPredicted RBP10.01□□□□□ -0.81
COPA-201ENST00000241704 IGHG1P01857 330 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 MSX1P28360 303 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 MVDP53602 400 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 NKX6-1P78426 367 aaPredicted RBP10.01□□□□□ -0.81
COPA-201ENST00000241704 RUNX2Q13950 521 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 TRIP6Q15654 476 aaKnown RBP10.01□□□□□ -0.81
COPA-201ENST00000241704 OR1N1Q8NGS0 311 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 OR10R2Q8NGX6 335 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 OR6K3Q8NGY3 331 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 GOT1L1Q8NHS2 421 aaPredicted RBP10.01□□□□□ -0.81
COPA-201ENST00000241704 NUDT22Q9BRQ3 303 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 CHST8Q9H2A9 424 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 SYNPO2LQ9H987 977 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 DNAJB11Q9UBS4 358 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 CCL27Q9Y4X3 112 aa10.01□□□□□ -0.81
COPA-201ENST00000241704 RP1P56715 2156 aa10□□□□□ -0.81
COPA-201ENST00000241704 A0A087WV62 115 aa10□□□□□ -0.81
COPA-201ENST00000241704 OR6C68A6NDL8 312 aa10□□□□□ -0.81
COPA-201ENST00000241704 ZNF585AQ6P3V2 769 aa10□□□□□ -0.81
COPA-201ENST00000241704 ESPNLQ6ZVH7 1005 aa10□□□□□ -0.81
COPA-201ENST00000241704 PRICKLE2Q7Z3G6 844 aa10□□□□□ -0.81
COPA-201ENST00000241704 LINC01555Q8NAE3 123 aa10□□□□□ -0.81
COPA-201ENST00000241704 OR5M1Q8NGP8 315 aa10□□□□□ -0.81
COPA-201ENST00000241704 OR2I1PQ8NGU4 316 aa10□□□□□ -0.81
COPA-201ENST00000241704 MFRPQ9BY79 579 aa10□□□□□ -0.81
COPA-201ENST00000241704 ZNF442Q9H7R0 627 aa10□□□□□ -0.81
COPA-201ENST00000241704 BRCA1P38398 1863 aaKnown RBP10□□□□□ -0.81
COPA-201ENST00000241704 PPM1DO15297 605 aa10□□□□□ -0.81
COPA-201ENST00000241704 IFNA10P01566 189 aa10□□□□□ -0.81
COPA-201ENST00000241704 TMEM225BP0DP42 221 aa10□□□□□ -0.81
COPA-201ENST00000241704 ADH7P40394 386 aa10□□□□□ -0.81
COPA-201ENST00000241704 EIF1P41567 113 aaKnown RBP10□□□□□ -0.81
COPA-201ENST00000241704 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
COPA-201ENST00000241704 PPP1R35Q8TAP8 253 aa10□□□□□ -0.81
COPA-201ENST00000241704 UBL7Q96S82 380 aaPredicted RBP10□□□□□ -0.81
COPA-201ENST00000241704 TRBV23-1A0A0A0MS06 115 aa10□□□□□ -0.81
COPA-201ENST00000241704 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
COPA-201ENST00000241704 SIGLEC5O15389 551 aa10□□□□□ -0.81
COPA-201ENST00000241704 SLC16A7O60669 478 aa10□□□□□ -0.81
COPA-201ENST00000241704 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
COPA-201ENST00000241704 ELFN2Q5R3F8 820 aa10□□□□□ -0.81
COPA-201ENST00000241704 OR1S1Q8NH92 325 aa10□□□□□ -0.81
COPA-201ENST00000241704 TAAR9Q96RI9 348 aa10□□□□□ -0.81
COPA-201ENST00000241704 ATG5Q9H1Y0 275 aa10□□□□□ -0.81
COPA-201ENST00000241704 TCEAL2Q9H3H9 227 aaPredicted RBP10□□□□□ -0.81
COPA-201ENST00000241704 TMEM231Q9H6L2 316 aa10□□□□□ -0.81
COPA-201ENST00000241704 PRDM7Q9NQW5 492 aa10□□□□□ -0.81
COPA-201ENST00000241704 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
COPA-201ENST00000241704 WIF1Q9Y5W5 379 aa10□□□□□ -0.81
COPA-201ENST00000241704 PRAMEF25A6NGN4 478 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 NUDT21O43809 227 aaKnown RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 TBX19O60806 448 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 AMY2AP04746 511 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 LIMS3P0CW19 117 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 LIMS4P0CW20 117 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 KIR2DL1P43626 348 aaPredicted RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 POLR2HP52434 150 aaKnown RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 RAE1P78406 368 aaKnown RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 INSL4Q14641 139 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 GXYLT1Q4G148 440 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 NHLRC1Q6VVB1 395 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 OR2W3Q7Z3T1 314 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 OR13C3Q8NGS6 347 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 CPT1CQ8TCG5 803 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 RXFP4Q8TDU9 374 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 GHSRQ92847 366 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 FAM71F1Q96KD3 344 aaPredicted RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 CALHM2Q9HA72 323 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 SEMA4GQ9NTN9 838 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 ZNF701Q9NV72 531 aaPredicted RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 FBXL4Q9UKA2 621 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 TMEM72A0PK05 275 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 MEGF11A6BM72 1044 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 TVP23AA6NH52 213 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 RFPL4AA6NLU0 287 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 RFPL4AL1F8VTS6 287 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 ADAM10O14672 748 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 BCL2L11O43521 198 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 FCMRO60667 390 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 MAS1P04201 325 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 F13BP05160 661 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 CD53P19397 219 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 PRSS3P35030 304 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 CARD18P57730 90 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 PCBD1P61457 104 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 DUSP8Q13202 625 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 TCTN3Q6NUS6 607 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 GUSBP11Q6P575 273 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 VHLLQ6RSH7 139 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 GPR148Q8TDV2 347 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 WDR89Q96FK6 387 aaPredicted RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 LRFN1Q9P244 771 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 MBD1Q9UIS9 605 aaPredicted RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 KLF13Q9Y2Y9 288 aaPredicted RBP9.99□□□□□ -0.81
COPA-201ENST00000241704 A0A087WUU8 490 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 SYT7O43581 403 aa9.99□□□□□ -0.81
COPA-201ENST00000241704 IFNA21P01568 189 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms