RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 NKIRAS2Q9NYR9 191 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 GTF2A1LQ9UNN4 478 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 FLVCR2Q9UPI3 526 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 EMC9Q9Y3B6 208 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 LOC390937A0A1W2PQ73 354 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 H3BML4 177 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 NDUFB6O95139 128 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 CPN1P15169 458 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 FAUP35544 74 aaKnown RBP14.44□□□□□ -0.1
UBE3D-201ENST00000237186 SIGLEC14Q08ET2 396 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 SNTA1Q13424 505 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 LINC00303Q3SY05 128 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 C3orf33Q6P1S2 294 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 TMEM81Q6P7N7 255 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 LYPD6Q86Y78 171 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 OR6M1Q8NGM8 313 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 IFI44Q8TCB0 444 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 SLC25A44Q96H78 314 aaPredicted RBP14.44□□□□□ -0.1
UBE3D-201ENST00000237186 GPR137Q96N19 417 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 OR10A4Q9H209 315 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 GAREM1Q9H706 876 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 AKIRIN1Q9H9L7 192 aaPredicted RBP14.44□□□□□ -0.1
UBE3D-201ENST00000237186 FSCN3Q9NQT6 498 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 CYB5R1Q9UHQ9 305 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 SCP2D1Q9UJQ7 156 aa14.44□□□□□ -0.1
UBE3D-201ENST00000237186 TMEM269A0A1B0GVZ9 245 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 SHISA8B8ZZ34 492 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 LAMTOR5O43504 91 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 SSNA1O43805 119 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 RAD1O60671 282 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 ALDOBP05062 364 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 CSF1P09603 554 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 UBCP0CG48 685 aaKnown RBP14.43□□□□□ -0.1
UBE3D-201ENST00000237186 HTR2CP28335 458 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 VEGFCP49767 419 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 BIDP55957 195 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 GALK2Q01415 458 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 TRA2AQ13595 282 aaKnown RBP eCLIP14.43□□□□□ -0.1
UBE3D-201ENST00000237186 PCOLCEQ15113 449 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 C1orf100Q5SVJ3 147 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 LRFN4Q6PJG9 635 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 GLDNQ6ZMI3 551 aaPredicted RBP14.43□□□□□ -0.1
UBE3D-201ENST00000237186 ZNF431Q8TF32 576 aaPredicted RBP14.43□□□□□ -0.1
UBE3D-201ENST00000237186 C11orf40Q8WZ69 217 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 DLL4Q9NR61 685 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 TAS2R4Q9NYW5 299 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 MGAT4AQ9UM21 535 aa14.43□□□□□ -0.1
UBE3D-201ENST00000237186 A0A0A6YYH2 397 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 TMEM272A0A1B0GTI8 110 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 LOC102725191A0A1B0GVB3 256 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 A6NJ64 397 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 SNRPGP15A8MWD9 76 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 SULT1C2O00338 296 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 LDLRAD4O15165 306 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 ALX3O95076 343 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 GABRA1P14867 456 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 EIF1P41567 113 aaKnown RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 ZP1P60852 638 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 SNRPD2P62316 118 aaKnown RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 PHF19Q5T6S3 580 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 LINC00346Q8IVM7 164 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 SPICQ8N5J4 248 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 WDSUB1Q8N9V3 476 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 PLPP7Q8NBV4 271 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 OR11H4Q8NGC9 324 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 SLC25A43Q8WUT9 341 aaPredicted RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 PIGKQ92643 395 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 PTX4Q96A99 478 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 LOC107986453A0A1B0GWG9 222 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 NTN3O00634 580 aaPredicted RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 TP53I11O14683 189 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 ARPC1BO15143 372 aaKnown RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 H2BFMP0C1H6 154 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 LAP3P28838 519 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 PRSS3P35030 304 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 CAPZA1P52907 286 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 Q6ZTK2 550 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 RHOUQ7L0Q8 258 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 UEVLDQ8IX04 471 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 GPX8Q8TED1 209 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 FOXRED1Q96CU9 486 aaPredicted RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 RADILQ96JH8 1075 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 IMMP1LQ96LU5 166 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 EMC6Q9BV81 110 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 ZNF436Q9C0F3 470 aaPredicted RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 FAM206AQ9NX38 181 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 FBXL2Q9UKC9 423 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 HDGFL3Q9Y3E1 203 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 PCDHGA5Q9Y5G8 931 aa14.42□□□□□ -0.1
UBE3D-201ENST00000237186 MRPS18BQ9Y676 258 aaKnown RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 CHCHD2Q9Y6H1 151 aaPredicted RBP14.42□□□□□ -0.1
UBE3D-201ENST00000237186 ASCC3Q8N3C0 2202 aaKnown RBP14.41□□□□□ -0.1
UBE3D-201ENST00000237186 TRAV18A0A075B6X5 111 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 ANKRD34BA5PLL1 514 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 PGA4P0DJD7 388 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 PGA3P0DJD8 388 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 DNASE1L1P49184 302 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 PCGF3Q3KNV8 242 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 GLYATL3Q5SZD4 288 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 HDDC2Q7Z4H3 204 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms