RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TMEM123Q8N131 208 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 OR8D4Q8NGM9 314 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 DOK4Q8TEW6 326 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 SOX7Q9BT81 388 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 ADAMTS5Q9UNA0 930 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 ZFAND5O76080 213 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 HLXQ14774 488 aaPredicted RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 PHLDA2Q53GA4 152 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 SCMH1Q96GD3 660 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 AKR1E2Q96JD6 320 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 CST2P09228 141 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 EMP3P54852 163 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 RELL2Q8NC24 303 aaPredicted RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 OR4C16Q8NGL9 310 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 EDEM2Q9BV94 578 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 B3GAT1Q9P2W7 334 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 DNAJA3Q96EY1 480 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 CHRM4P08173 479 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 CD79AP11912 226 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ALOX5APP20292 161 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 LIPNQ5VXI9 398 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FAHD2BQ6P2I3 314 aaPredicted RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 ADAMTSL4Q6UY14 1074 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FAM174AQ8TBP5 190 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FAHD2AQ96GK7 314 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 LINC00862A6NCI5 91 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 C4orf47A7E2U8 309 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OR5M10Q6IEU7 315 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 PIGCQ92535 297 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 PINX1Q96BK5 328 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 SERPINE3A8MV23 424 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 CCKARP32238 428 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FGGYQ96C11 551 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 SLC35A4Q96G79 324 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ST6GAL2Q96JF0 529 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 SNRPEP62304 92 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 TMEM201Q5SNT2 666 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ABLIM2Q6H8Q1 611 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 PRICKLE2Q7Z3G6 844 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ANGPTL5Q86XS5 388 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 P2RY12Q9H244 342 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 COL14A1Q05707 1796 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 CCDC187A0A096LP49 1063 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FZD9O00144 591 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OR8U8P0C7N1 319 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 NOVA1P51513 510 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 RBMXL3Q8N7X1 1067 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 LMNTD1Q8N9Z9 388 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FAM122AQ96E09 287 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 GMLQ99445 158 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 SUCNR1Q9BXA5 334 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ZNF385DQ9H6B1 395 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 LEUTXA8MZ59 168 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 HMGN4O00479 90 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 EIF4E2O60573 245 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 SELENOFO60613 162 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ZNF217O75362 1048 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 CBX7O95931 251 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 MSX1P28360 303 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FXNQ16595 210 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 GUK1Q16774 197 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ACSM5Q6NUN0 579 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 SLC16A12Q6ZSM3 486 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 SLC25A43Q8WUT9 341 aaPredicted RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 GDE1Q9NZC3 331 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 DNMT3BQ9UBC3 853 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 CT45A10P0DMU9 189 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 PCBP4P57723 403 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 PFN3P60673 137 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 PPP1CBP62140 327 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 STAC2Q6ZMT1 411 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 GRINAQ7Z429 371 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 CD99L2Q8TCZ2 262 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 NTNG2Q96CW9 530 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 AKAP6Q13023 2319 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 H0YGG7 62 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 P2RY10O00398 339 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OPN1MWP04001 364 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OPN1MW2P0DN77 364 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OPN1MW3P0DN78 364 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 AFMIDQ63HM1 303 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ABHD17CQ6PCB6 329 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OR2AE1Q8NHA4 323 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 OR10J5Q8NHC4 309 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ZC3HAV1LQ96H79 300 aaKnown RBP7.53□□□□□ -1.2
APOB-201ENST00000233242 PBX4Q9BYU1 374 aa7.53□□□□□ -1.2
APOB-201ENST00000233242 ALPK2Q86TB3 2170 aa7.52□□□□□ -1.2
APOB-201ENST00000233242 MAN2B1O00754 1011 aa7.52□□□□□ -1.2
APOB-201ENST00000233242 M1APQ8TC57 530 aa7.52□□□□□ -1.2
APOB-201ENST00000233242 HGDQ93099 445 aa7.52□□□□□ -1.2
APOB-201ENST00000233242 ARSAP15289 507 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 OR2W3Q7Z3T1 314 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 TMED7-TICAM2A0A0A6YYA0 188 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms