RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 AQP6Q13520 282 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 CRMP1Q14194 572 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 KPNB1Q14974 876 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 RAB35Q15286 201 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 KCNMB1Q16558 191 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 CLEC12BQ2HXU8 276 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 KRTAP21-3Q3LHN1 58 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 CCDC92Q53HC0 331 aaPredicted RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 ACSM5Q6NUN0 579 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 CORO6Q6QEF8 472 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 VASH1Q7L8A9 365 aaPredicted RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 SYT9Q86SS6 491 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 ZBTB46Q86UZ6 589 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 ZNF101Q8IZC7 436 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 ZCCHC24Q8N2G6 241 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 CIARTQ8N365 385 aaPredicted RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 SLC26A10Q8NG04 563 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 OR51L1Q8NGJ5 315 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 OR5K1Q8NHB7 308 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 PYDC1Q8WXC3 89 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 SLC7A6Q92536 515 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 MRPL24Q96A35 216 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 DUS3LQ96G46 650 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 SORCS2Q96PQ0 1159 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 DOK1Q99704 481 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 VRK1Q99986 396 aaPredicted RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 ZNF556Q9HAH1 456 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 DLL4Q9NR61 685 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 MYEF2Q9P2K5 600 aaKnown RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 BAIAP2Q9UQB8 552 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 FKBP7Q9Y680 259 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 LHFPL6Q9Y693 200 aa10.91□□□□□ -0.66
LSM5-201ENST00000223084 ZNF469Q96JG9 3925 aaPredicted RBP10.91□□□□□ -0.66
LSM5-201ENST00000223084 TVP23AA6NH52 213 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 SGCEO43556 437 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 SNAP29O95721 258 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 CLPTM1O96005 669 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 HLA-DQA2P01906 255 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 GYPBP06028 91 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 LCKP06239 509 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 CLUP10909 449 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 BMP4P12644 408 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 OSMP13725 252 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 FASP25445 335 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 HTR5AP47898 357 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 DAPP51397 102 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 ARHGDIAP52565 204 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 NUDT6P53370 316 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 UCP2P55851 309 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 RPS23P62266 143 aaKnown RBP10.9□□□□□ -0.66
LSM5-201ENST00000223084 GLO1Q04760 184 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 GINS1Q14691 196 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 ALKBH6Q3KRA9 238 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 SPATA46Q5T0L3 261 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 RGS7BPQ6MZT1 257 aaPredicted RBP10.9□□□□□ -0.66
LSM5-201ENST00000223084 LYPD4Q6UWN0 246 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 LINC00346Q8IVM7 164 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 ALDH16A1Q8IZ83 802 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 PROKR2Q8NFJ6 384 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 NRBF2Q96F24 287 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 RBM4Q9BWF3 364 aaKnown RBP10.9□□□□□ -0.66
LSM5-201ENST00000223084 SEMA6AQ9H2E6 1030 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 MED20Q9H944 212 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 MRPL22Q9NWU5 206 aaKnown RBP10.9□□□□□ -0.66
LSM5-201ENST00000223084 PLEK2Q9NYT0 353 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 KIF17Q9P2E2 1029 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 DUSP13Q9UII6 198 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
LSM5-201ENST00000223084 CHD3Q12873 2000 aaKnown RBP10.9□□□□□ -0.66
LSM5-201ENST00000223084 NAV3Q8IVL0 2385 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 FAM183AA6NL82 134 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 RIIAD1A6NNX1 92 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 H7C1Q1 480 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 SMAD7O15105 426 aaKnown RBP10.89□□□□□ -0.67
LSM5-201ENST00000223084 SYNGR3O43761 229 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 MITFO75030 526 aaPredicted RBP10.89□□□□□ -0.67
LSM5-201ENST00000223084 NGFP01138 241 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 ADRA2AP08913 450 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 ZNF23P17027 643 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 PCSK6P29122 969 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 GRK5P34947 590 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 RPS27P42677 84 aaKnown RBP10.89□□□□□ -0.67
LSM5-201ENST00000223084 RAD52P43351 418 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 ALDH3B1P43353 468 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 ACTR3P61158 418 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 TNK1Q13470 666 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 MAD2L1BPQ15013 274 aaPredicted RBP10.89□□□□□ -0.67
LSM5-201ENST00000223084 TMEM236Q5W0B7 351 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 FAHD1Q6P587 224 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 RFPL4BQ6ZWI9 263 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 OR10H5Q8NGA6 315 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 OR1J1Q8NGS3 322 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 OR2T4Q8NH00 348 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 WACQ9BTA9 647 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 NMNAT2Q9BZQ4 307 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 BARX1Q9HBU1 254 aaPredicted RBP10.89□□□□□ -0.67
LSM5-201ENST00000223084 DYNLRB1Q9NP97 96 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms