RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LINC00696Q6ZRV3 163 aa13.46□□□□□ -0.26
SPTLC2-201ENST00000216484 RXFP4Q8TDU9 374 aa13.46□□□□□ -0.26
SPTLC2-201ENST00000216484 FAM3CQ92520 227 aa13.46□□□□□ -0.26
SPTLC2-201ENST00000216484 FAAP24Q9BTP7 215 aa13.46□□□□□ -0.26
SPTLC2-201ENST00000216484 TWSG1Q9GZX9 223 aa13.46□□□□□ -0.26
SPTLC2-201ENST00000216484 GYPAP02724 150 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 EMC10Q5UCC4 262 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 RNF224P0DH78 156 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 SULT1A1P50225 295 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 RRADP55042 308 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 HIST1H3AP68431 136 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 C17orf67Q0P5P2 114 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 GTDC1Q4AE62 458 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 OR5AP2Q8NGF4 316 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 CHST6Q9GZX3 395 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 MSL2Q9HCI7 577 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 TMEM59LQ9UK28 342 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 GPR55Q9Y2T6 319 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 NFS1Q9Y697 457 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 PIAS3Q9Y6X2 628 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 ARSDP51689 593 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 PCBP4P57723 403 aaKnown RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 ALKBH1Q13686 389 aaKnown RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 MOB3AQ96BX8 217 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF407Q9C0G0 2248 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 FCGR2CP31995 323 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 RBP2P50120 134 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 GPM6AP51674 278 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 RAB1AP62820 205 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 PAX5Q02548 391 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 HSD17B13Q7Z5P4 300 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 RETREG3Q86VR2 466 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 TMEM25Q86YD3 366 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 OR52I1Q8NGK6 324 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 TMEM208Q9BTX3 173 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 APOOQ9BUR5 198 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 SERTM1A2A2V5 107 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 PLRG1O43660 514 aaKnown RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 NEURL1O76050 574 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 ADRA2CP18825 462 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 UBE2L5PA0A1B0GUS4 154 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 G3V3Y1 287 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 C1orf105O95561 183 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 GIPP09681 153 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 FCN2Q15485 313 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 OR52E1Q8NGJ3 308 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 GNPNAT1Q96EK6 184 aaPredicted RBP13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 ANKRD10Q9NXR5 420 aa13.45□□□□□ -0.26
SPTLC2-201ENST00000216484 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 DCXRQ7Z4W1 244 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 SLC7A6Q92536 515 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 LHX4Q969G2 390 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 MRPS24Q96EL2 167 aaKnown RBP13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF778Q96MU6 729 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 TMX2-CTNND1H3BSU7 103 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 CALCBP10092 127 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 OR1J1Q8NGS3 322 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ZDHHC16Q969W1 377 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 NECTIN4Q96NY8 510 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 FREM3P0C091 2139 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 FBP1P09467 338 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 CPMP14384 443 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 SUOXP51687 545 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 RING1Q06587 406 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 B3GNTL1Q67FW5 361 aaPredicted RBP13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 SCGB1D4Q6XE38 83 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 VASH2Q86V25 355 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ARHGEF39Q8N4T4 335 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ST8SIA4Q92187 359 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 MOKQ9UQ07 419 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ST8SIA3O43173 380 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 SPINK4O60575 86 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ALOX5APP20292 161 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 FRMPD2BQ6IN97 320 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ACSM6Q6P461 480 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 GLIPR1L1Q6UWM5 242 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 ENTPD2Q9Y5L3 495 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 GJC3Q8NFK1 279 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 MCM3APO60318 1980 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 GALR1P47211 349 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 FOXA1P55317 472 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 SEH1LQ96EE3 360 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 OR5V1Q9UGF6 321 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 UFC1Q9Y3C8 167 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 SNX11Q9Y5W9 270 aa13.44□□□□□ -0.26
SPTLC2-201ENST00000216484 CA12O43570 354 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 WDR1O75083 606 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SNNO75324 88 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ETV3LQ6ZN32 361 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF561Q8N587 486 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 FAM71CQ8NEG0 241 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 OR1L4Q8NGR5 311 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 PCED1AQ9H1Q7 454 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CRLF2Q9HC73 371 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 TAAR5O14804 337 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms