RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Spryd4Q91WK1 207 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ackr4Q924I3 350 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 NmbQ9CR53 121 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Phospho2Q9D9M5 241 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Lat2Q9JHL0 203 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Sh3bgrlQ9JJU8 114 aaKnown RBP11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Actr10Q9QZB7 417 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 MthfrQ9WU20 654 aa11.73□□□□□ -0.53
Nup88-203ENSMUST00000108531 Fam90a1aA2A4E2 429 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1156A2AVC3 323 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2abC0HKE1 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2acC0HKE2 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2adC0HKE3 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2aeC0HKE4 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2agC0HKE5 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2aiC0HKE6 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2anC0HKE7 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2aoC0HKE8 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2apC0HKE9 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Pcdh17E9PXF0 1157 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cdh19E9Q3A7 770 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gm5407E9Q7Q1 248 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r120K7N6J6 305 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r94K7N6X3 305 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gpr52P0C5J4 361 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Csrp1P97315 193 aaKnown RBP11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 G6pd2P97324 513 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 RptnP97347 1118 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ttyh2Q3TH73 532 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 CmahQ61419 577 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tgfbr2Q62312 592 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Grm7Q68ED2 915 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Zfp82Q6P9Y7 530 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Uhrf2Q7TMI3 803 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Doc2aQ7TNF0 405 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tas2r143Q7TQB9 293 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1219Q7TR04 311 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist3h2aQ8BFU2 130 aaKnown RBP11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Comtd1Q8BIG7 262 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hist1h2afQ8CGP5 130 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ppp1r14cQ8R4S0 164 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1378Q8VGH0 315 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Rnf138Q9CQE0 245 aaKnown RBP11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Otub2Q9CQX0 234 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Dph7Q9CYU6 477 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Taf8Q9EQH4 308 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Pde7bQ9QXQ1 446 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Avpr1bQ9WU02 421 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gm42372A0A1B0GT27 204 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tmem156A0A1D5RLR8 321 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Klhl15A2AAX3 604 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Rhox3gB9EJQ9 160 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Psg20E9Q9B4 475 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 4930451I11RikE9Q9R3 111 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Zmat3O54836 290 aaKnown RBP11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Lyl1P27792 278 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 FapP97321 761 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Gcnt2P97402 401 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc2a6Q3UDF0 497 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1126Q7TR49 314 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Chst14Q80V53 376 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Rft1Q8C3B8 541 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Q8C3I9 435 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Phf21bQ8C966 487 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Akr7a2Q8CG76 367 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Fbxo4Q8CHQ0 385 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 CthQ8VCN5 398 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr993Q8VF75 314 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1217Q8VGG1 304 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Flvcr2Q91X85 551 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slco1b2Q9JJL3 689 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Arl6ip1Q9JKW0 203 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Six6Q9QZ28 246 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ca5bQ9QZA0 317 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Sfrp5Q9WU66 314 aa11.72□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1109A2AT96 312 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1112A2ATA0 318 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ighg2cF6TQW2 404 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Sstr5O08858 362 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Galr2O88854 371 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Nfkbil1O88995 381 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 P01864 335 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Bdkrb2P32299 392 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Serpinf1P97298 417 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Wbp1P97764 304 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ankub1Q3UUE9 192 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tnfrsf8Q60846 498 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Znf511Q6P0X2 227 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Rps27Q6ZWU9 84 aaKnown RBP11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 H2-M10.5Q85ZW7 330 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 SbsnQ8CIT9 700 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1151Q8VFQ8 308 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc39a8Q91W10 462 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Egln2Q91YE2 419 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Mettl18Q9CZ09 362 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Emc4Q9CZX9 183 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tmem41aQ9D8U2 264 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Pycr3Q9DCC4 274 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Bin3Q9JI08 253 aa11.71□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cryba2Q9JJV1 197 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms