RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ttc29Q80VM3 471 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Apbb3Q8R1C9 486 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Tmed4Q8R1V4 227 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Olfr849Q8VFF6 312 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Olfr970Q8VFN3 311 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Olfr394Q8VGR5 310 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Bex4Q9CWT2 118 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Rita1Q9D1H0 253 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Ankrd22Q9D3J5 191 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Alg2Q9DBE8 415 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Tas2r105Q9JKT4 300 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Jbts17Q8CE72 3214 aa8.9□□□□□ -0.98
Ccdc40-202ENSMUST00000053440 Sult6b2B7ZWN4 290 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Gm21560D3Z7A4 205 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Dcpp2E9PYC2 171 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Nr1h5E9Q5A6 505 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 5830473C10RikF8VQ07 620 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Gm3099J3QPA5 205 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Dcpp1L7N1X9 171 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 4930555G01RikL7N253 205 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 P20040 264 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Il5raP21183 415 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Pou2f1P25425 770 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Sec61a1P61620 476 aaKnown RBP8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Six5P70178 719 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Mmp25Q3U435 615 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Adgrg5Q3V3Z3 524 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Plpp1Q61469 283 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Carns1Q6ZPS2 827 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Rell2Q8BRJ3 303 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Timmdc1Q8BUY5 285 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Ocel1Q8VCR9 219 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Med28Q920D3 178 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Ubox5Q925F4 539 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Stoml2Q99JB2 353 aaKnown RBP8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Usp18Q9WTV6 368 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr545Q9WU94 316 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 FancmQ8BGE5 2021 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Atg2bQ80XK6 2075 aa8.9□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Gm13090A2A899 111 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Rhox1B1APN4 224 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 ItpkbB2RXC2 942 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Vmn2r41E9Q5C7 852 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Vmn2r48E9Q5D8 855 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 4930451I11RikE9Q9R3 111 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Vmn2r40F6W043 852 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Vmn2r36K7N741 852 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Nfkbil1O88995 381 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Igsf6P0C6B7 237 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Tpi1P17751 299 aaKnown RBP8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Alg11Q3TZM9 492 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Ift52Q62559 426 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Spin2cQ6NVE3 257 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Phf21aQ6ZPK0 659 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Gpr137Q80ZU9 396 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Mospd3Q8BGG6 235 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Nars2Q8BGV0 477 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Q8C4X7 151 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr646Q8VGW2 312 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 NmbQ9CR53 121 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Lrrc51Q9DAK8 192 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Kcnmb4Q9JIN6 210 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Lhx6Q9R1R0 363 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Gm17087V9GXQ2 156 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Ranbp2Q9ERU9 3053 aaKnown RBP8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Btbd35f23A0A0R4J2B9 498 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr1130A0A1L1SQT2 314 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Gm34653A0A1L1SR01 368 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 4930563M21RikA0A1L1SUT5 578 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Fam90a1aA2A4E2 429 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr1129A2AV41 314 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr585E9PXW4 318 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Cdh19E9Q3A7 770 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Prps1l3G3UXL2 318 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Vmn1r115K7N6Y3 295 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Wnt9bO35468 359 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Rad51dO55230 329 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Ighg1P01869 393 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Hoxd12P23812 268 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 ArsbP50429 534 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Fbxo31Q3TQF0 507 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Nufip2Q5F2E7 692 aaKnown RBP8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Fzd7Q61090 572 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Ssr4Q62186 172 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr1134Q7TR43 312 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Pgm2Q7TSV4 620 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Comtd1Q8BIG7 262 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Tmbim1Q8BJZ3 309 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Tmem198bQ8CFU0 350 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Zdhhc1Q8R0N9 484 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 ApehQ8R146 732 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Efcab7Q8VDY4 628 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr486Q8VFD0 314 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Olfr678Q8VG26 313 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Emc3Q99KI3 261 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 Tmem51Q99LG1 249 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 SvbpQ99LQ4 66 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 OgfrQ99PG2 633 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 BambiQ9D0L6 260 aa8.89□□□□□ -0.99
Ccdc40-202ENSMUST00000053440 1700034E13RikQ9D2T6 108 aa8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms