RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Vmn1r139E9Q8L6 297 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r112G3UY48 297 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cyp2j8G3UZ38 503 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn2r69G3XA45 850 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r135K9J7G0 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r125L7N227 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r116L7N2A6 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn2r29L7N2D4 852 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Klrg1O88713 188 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 ItgamP05555 1153 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pou3f2P31360 445 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Il2rgP34902 369 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cnr1P47746 473 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ccr2P51683 373 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cmpk2Q3U5Q7 447 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Bod1Q5SQY2 173 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm13757Q7TR17 305 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr270Q7TS19 314 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pif1Q80SX8 650 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Impad1Q80V26 356 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fam53bQ8BGR5 422 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fam221aQ8C790 301 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 LiphQ8CIV3 451 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr998Q8VF76 314 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1377Q8VGH1 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr829Q8VGX1 321 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Krt88Q9CPR6 171 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tex33Q9D9J2 266 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Izumo1Q9D9J7 397 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r100Q9EPS5 307 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gab1Q9QYY0 695 aa7.8□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gvin1Q80SU7 2427 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Igkv9-124A0A0G2JDR3 117 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rdh8D3Z6W3 317 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rab12P35283 243 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 TtkP35761 856 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 PrkacbP68181 351 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Art5P70352 309 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 PkibQ04758 92 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ppp1r14dQ7TT52 146 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fbll1Q80WS3 314 aaKnown RBP7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cdk3Q80YP0 303 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rxfp3Q8BGE9 472 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Adprhl1Q8BGK2 353 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem222Q8BVA2 208 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mblac1Q8BWY4 260 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r231Q8R2A3 311 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ttc36Q8VBW8 186 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Dnaja3Q99M87 480 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Desi1Q9CQT7 168 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Plekhj1Q9D240 164 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 GabarapQ9DCD6 117 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sec61a2Q9JLR1 476 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Bloc1s6Q9R0C0 172 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 RelnQ60841 3461 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Smim17A0A504 109 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 DytnA2CI98 653 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm266A6H634 200 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Dpy19l1A6X919 746 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm4787B2RUD9 748 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm45062E0CZ38 131 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr655E9Q252 308 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Raet1cO08604 253 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Entpd6Q3U0P5 455 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ankrd53Q3V0J4 497 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ptpmt1Q66GT5 193 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr843Q7TRG4 313 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr374Q7TRY0 313 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Q80UB0 333 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Orai1Q8BWG9 304 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 March11Q8CBH7 400 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zdhhc1Q8R0N9 484 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Paip1Q8VE62 400 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Abtb1Q99LJ2 478 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc29a3Q99P65 475 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cdca5Q9CPY3 264 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cela3bQ9CQ52 269 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Q9DAD0 168 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cpn2Q9DBB9 547 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Dap3Q9ER88 391 aaKnown RBP7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 Deaf1Q9Z1T5 566 aa7.79□□□□□ -1.16
Trim39-201ENSMUST00000042717 CenpeQ6RT24 2474 aaKnown RBP7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Arfgef3Q3UGY8 2170 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 2410004P03RikA0A087WQY2 205 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Trbc1A0A0A6YWV4 173 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Klhl15A2AAX3 604 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1018A2ASV3 311 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc25a25A2ASZ8 469 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zfp141G3UY09 685 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r103K7N6X7 305 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r122K7N726 305 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r151L7N288 305 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Wnt9bO35468 359 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tesk1O70146 627 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 P01852 173 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 MbpP04370 250 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ctla2aP12399 137 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cd40lgP27548 260 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mapk14P47811 360 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pitx2P97474 317 aa7.78□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms