RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LRP11Q86VZ4 500 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 POM121Q96HA1 1249 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 LRGUKQ96M69 825 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 ERMAPQ96PL5 475 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-231ENST00000641939 WACQ9BTA9 647 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 BCL2L14Q9BZR8 327 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 TRIM15Q9C019 465 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 OR51B6Q9H340 312 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 EMC7Q9NPA0 242 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 REV1Q9UBZ9 1251 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 DUSP13Q9UII6 198 aa12.92□□□□□ -0.34
PHGDH-231ENST00000641939 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 LOC390937A0A1W2PQ73 354 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 C5orf49A4QMS7 147 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 NDUFS8O00217 210 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 ARPC3O15145 178 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 TP53P04637 393 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-231ENST00000641939 IGFBP1P08833 259 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-231ENST00000641939 ZNF250P15622 560 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 CDKN2AP42771 156 aaKnown RBP12.91□□□□□ -0.34
PHGDH-231ENST00000641939 SELENOVP59797 346 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 LOXL1Q08397 574 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-231ENST00000641939 TRAP1Q12931 704 aaKnown RBP12.91□□□□□ -0.34
PHGDH-231ENST00000641939 CARTPTQ16568 116 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 ZNF774Q6NX45 483 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 UGT2A3Q6UWM9 527 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 ZNF620Q6ZNG0 422 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 GLB1L2Q8IW92 636 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 OR9Q2Q8NGE9 314 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 C11orf40Q8WZ69 217 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 SAMD8Q96LT4 415 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 FOXN4Q96NZ1 517 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 BTBD10Q9BSF8 475 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 IFT27Q9BW83 186 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 NUAK2Q9H093 628 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 MS4A5Q9H3V2 200 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 RERGLQ9H628 205 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 MYEF2Q9P2K5 600 aaKnown RBP12.91□□□□□ -0.34
PHGDH-231ENST00000641939 MALRD1Q5VYJ5 2156 aa12.91□□□□□ -0.34
PHGDH-231ENST00000641939 ANK3Q12955 4377 aaKnown RBP12.9□□□□□ -0.34
PHGDH-231ENST00000641939 A0A1W2PPW3 197 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 ACOT8O14734 319 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 GYG2O15488 501 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 CCNB2O95067 398 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 DAOP14920 347 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 CRABP1P29762 137 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 ALDH3B1P43353 468 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 KLF3P57682 345 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-231ENST00000641939 ERVS71-1P61550 626 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 LSM6P62312 80 aaKnown RBP12.9□□□□□ -0.34
PHGDH-231ENST00000641939 SCRN3Q0VDG4 424 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 DNAL1Q4LDG9 190 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 OR2T5Q6IEZ7 315 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 UNQ6126/PRO20091Q6UXV3 157 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 JAZF1Q86VZ6 243 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 ICA1LQ8NDH6 482 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 OR2T29Q8NH02 315 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 SYNPRQ8TBG9 265 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
PHGDH-231ENST00000641939 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
PHGDH-231ENST00000641939 COA3Q9Y2R0 106 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-231ENST00000641939 IGLV3-9A0A075B6K5 115 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 VWC2LB2RUY7 222 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 IDH3BO43837 385 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 CD5LO43866 347 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 CLPTM1O96005 669 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 RENP00797 406 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 RAP2AP10114 183 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 HIST1H1CP16403 213 aaKnown RBP12.89□□□□□ -0.35
PHGDH-231ENST00000641939 USF1P22415 310 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-231ENST00000641939 NOS3P29474 1203 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 WNT5AP41221 380 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 NR4A2P43354 598 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 PPP2R2BQ00005 443 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 PPP1R8Q12972 351 aaKnown RBP12.89□□□□□ -0.35
PHGDH-231ENST00000641939 AQP6Q13520 282 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 MAD2L1BPQ15013 274 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-231ENST00000641939 NKPD1Q17RQ9 610 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 ZNF770Q6IQ21 691 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-231ENST00000641939 RPL13AP3Q6NVV1 102 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 LEG1Q6P5S2 330 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 ZNF101Q8IZC7 436 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 OR1J1Q8NGS3 322 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 OR4K13Q8NH42 304 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 TSSK2Q96PF2 358 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 NMNAT3Q96T66 252 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 REEP1Q9H902 201 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 VNN3Q9NY84 501 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 SLCO1C1Q9NYB5 712 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 TAAR3PQ9P1P4 343 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 GPR160Q9UJ42 338 aa12.89□□□□□ -0.35
PHGDH-231ENST00000641939 NDRG4Q9ULP0 352 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms