RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ADGRG3Q86Y34 549 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 OR8B4Q96RC9 309 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 EMC6Q9BV81 110 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 MRPS18BQ9Y676 258 aaKnown RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 KCNMB2Q9Y691 235 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 CLPSP04118 112 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 PPICP45877 212 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 BLKP51451 505 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 DEFA5Q01523 94 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 GFOD2Q3B7J2 385 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 SLC22A6Q4U2R8 563 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 OR52W1Q6IF63 320 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 KCTD9Q7L273 389 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF679Q8IYX0 411 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 ARHGEF39Q8N4T4 335 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 PNPLA2Q96AD5 504 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 NPAS1Q99742 590 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 CUTCQ9NTM9 273 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 MRPL22Q9NWU5 206 aaKnown RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 MED29Q9NX70 200 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 LRP12Q9Y561 859 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 RNF215Q9Y6U7 377 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 CELSR3Q9NYQ7 3312 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 LOC101059948A0A1B0GTJ6 334 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 OR4E1P0C645 316 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 EGR3Q06889 387 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 SERTAD2Q14140 314 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 KIAA0895LQ68EN5 471 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 RHOUQ7L0Q8 258 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 SLC36A1Q7Z2H8 476 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-221ENST00000640341 BPIFB2Q8N4F0 458 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 STEAP2Q8NFT2 490 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 C15orf40Q8WUR7 153 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 MRI1Q9BV20 369 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 TAS2R8Q9NYW2 309 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 COL6A3P12111 3177 aa13.14□□□□□ -0.31
SCARB2-221ENST00000640341 P2RY10O00398 339 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 OR2A4O95047 310 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 PLATP00750 562 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 IL5P05113 134 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF823P16415 610 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 DCXRQ7Z4W1 244 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 OR6N1Q8NGY5 312 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ST8SIA4Q92187 359 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 MCHR2Q969V1 340 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 GPR160Q9UJ42 338 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 AUP1Q9Y679 476 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 TRBV5-7A0A0A0MS05 114 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 TMED7-TICAM2A0A0A6YYA0 188 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 SLC17A2O00624 439 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 GABRA1P14867 456 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 STARP49675 285 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 RPL27P61353 136 aaKnown RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 MRPS21P82921 87 aaKnown RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ISXQ2M1V0 245 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ASPHD2Q6ICH7 369 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 C3orf33Q6P1S2 294 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 SEZ6L2Q6UXD5 910 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 LANCL3Q6ZV70 420 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 C12orf45Q8N5I9 185 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ASB5Q8WWX0 329 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 DPYSL5Q9BPU6 564 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 PPA2Q9H2U2 334 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 EVA1AQ9H8M9 152 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 TMED7Q9Y3B3 224 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF736B4DX44 427 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF432O94892 652 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 DMWDQ09019 674 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 KCTD18Q6PI47 426 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 GPAT4Q86UL3 456 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 C5orf34Q96MH7 638 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 MSRAQ9UJ68 235 aa13.13□□□□□ -0.31
SCARB2-221ENST00000640341 MRTO4Q9UKD2 239 aaKnown RBP13.13□□□□□ -0.31
SCARB2-221ENST00000640341 TMEM269A0A1B0GVZ9 245 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 CDK2AP1O14519 115 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 AKR1C2P52895 323 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 AKR1C1Q04828 323 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 OR7A5Q15622 319 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 FNDC7Q5VTL7 733 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 CLEC1AQ8NC01 280 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 SCARB1Q8WTV0 552 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 SLC46A1Q96NT5 459 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 SLC7A5P2Q9GIP4 190 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 RHPN2P1A8MT19 583 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 AKR1C4P17516 323 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 CXADRP78310 365 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms