RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLC16A7O60669 478 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 SPDEFO95238 335 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 UBBP0CG47 229 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 UBCP0CG48 685 aaKnown RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 MGMTP16455 207 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 CCR5P51681 352 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 RPS27AP62979 156 aaKnown RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 UBA52P62987 128 aaKnown RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 INSM1Q01101 510 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 FGL1Q08830 312 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 GLYATL3Q5SZD4 288 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 POMZP3Q6PJE2 187 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF627Q7L945 461 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMEM151BQ8IW70 566 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 ADIPOR1Q96A54 375 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 MMACHCQ9Y4U1 282 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 EIF4E2O60573 245 aaKnown RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 PLGP00747 810 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 CD8AP01732 235 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 ADAM8P78325 824 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 MFGE8Q08431 387 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 HYAL1Q12794 435 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 TOMM34Q15785 309 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 OTPQ5XKR4 325 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 KIAA0895LQ68EN5 471 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 ADGRE4PQ86SQ3 457 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 PRR22Q8IZ63 422 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 OR10Z1Q8NGY1 313 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 FOXN4Q96NZ1 517 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 PTDSS2Q9BVG9 487 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 TXNIPQ9H3M7 391 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 TAS2R4Q9NYW5 299 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A0C4DFX4 3053 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A0D9SG52 128 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 MEGF11A6BM72 1044 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMEM150CB9EJG8 249 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 GMFGO60234 142 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 DOK2O60496 412 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 CYB5AP00167 134 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 RLN2P04090 185 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 IGKV3-11P04433 115 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 AMY2AP04746 511 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZMYND11Q15326 602 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 LPCAT3Q6P1A2 487 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 LRFN4Q6PJG9 635 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 GALNT16Q8N428 558 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 PPP1R14AQ96A00 147 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC25A36Q96CQ1 311 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 LRRC61Q9BV99 259 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 DNTTIP1Q9H147 329 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A1W2PQD3 144 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 TEX46H3BTG2 121 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 NUPL2O15504 423 aaKnown RBP18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 PGCP20142 388 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 IL12BP29460 328 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 PBX2P40425 430 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 MELKQ14680 651 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 ETFDHQ16134 617 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMED4Q7Z7H5 227 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF546Q86UE3 836 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 BEST3Q8N1M1 668 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 STEAP2Q8NFT2 490 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC25A44Q96H78 314 aaPredicted RBP18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC38A3Q99624 504 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 ABHD6Q9BV23 337 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 EDEM2Q9BV94 578 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 CACNA1CQ13936 2221 aa18.09■□□□□ 0.49
SYNGAP1-227ENST00000638142 FITM1A5D6W6 292 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 CD74P04233 296 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 GP1BBP13224 206 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 CTLA4P16410 223 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 DCAF7P61962 342 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 EIF2B1Q14232 305 aaKnown RBP18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 STK35Q8TDR2 534 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 DNAJA3Q96EY1 480 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 GAL3ST4Q96RP7 486 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 TINAGL1Q9GZM7 467 aaPredicted RBP18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 SOHLH2Q9NX45 425 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 LRP12Q9Y561 859 aa18.08■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A1B0GTI1 187 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 ZNF736B4DX44 427 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 M0QYG6 137 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 DXOO77932 396 aaKnown RBP18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 NUDT14O95848 222 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 FASLGP48023 281 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 SRSF4Q08170 494 aaKnown RBP18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 ATPAF1Q5TC12 328 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 PXT1Q8NFP0 134 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR5M8Q8NGP6 311 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR52N5Q8NH56 324 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 ST8SIA2Q92186 375 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 NKX3-1Q99801 234 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 SLC6A15Q9H2J7 730 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 MRPS18BQ9Y676 258 aaKnown RBP18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 REV3LO60673 3130 aa18.08■□□□□ 0.48
SYNGAP1-227ENST00000638142 ALG1L2C9J202 215 aa18.07■□□□□ 0.48
SYNGAP1-227ENST00000638142 LDLRAD4O15165 306 aa18.07■□□□□ 0.48
SYNGAP1-227ENST00000638142 IGHMP01871 453 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms