RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LRRC37BQ96QE4 947 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 SYT4Q9H2B2 425 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 MS4A5Q9H3V2 200 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 RERGLQ9H628 205 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 MAGEL2Q9UJ55 1249 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 TMEM5Q9Y2B1 443 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 IER3IP1Q9Y5U9 82 aa15.15■□□□□ 0.02
PNKP-230ENST00000638016 PRSS37A4D1T9 235 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 NDUFB2O95178 105 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 NGFP01138 241 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 TACSTD2P09758 323 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 NR2C1P13056 603 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 MSR1P21757 451 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 GDI2P50395 445 aaKnown RBP15.14■□□□□ 0.01
PNKP-230ENST00000638016 CCL8P80075 99 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 SAMD4BQ5PRF9 694 aaKnown RBP15.14■□□□□ 0.01
PNKP-230ENST00000638016 ZER1Q7Z7L7 766 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 SLC25A40Q8TBP6 338 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 IPCEF1Q8WWN9 437 aaPredicted RBP15.14■□□□□ 0.01
PNKP-230ENST00000638016 C11orf40Q8WZ69 217 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 NSMCE2Q96MF7 247 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 BCL2L14Q9BZR8 327 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 LRMDAQ9H2I8 198 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 POFUT1Q9H488 388 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 NRIP3Q9NQ35 241 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 ZNF275Q9NSD4 429 aaPredicted RBP15.14■□□□□ 0.01
PNKP-230ENST00000638016 COL6A5A8TX70 2615 aa15.14■□□□□ 0.01
PNKP-230ENST00000638016 UNC119BA6NIH7 251 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 C17orf100A8MU93 164 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 XKRYO14609 159 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 CDC14BO60729 498 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 GMNNO75496 209 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 RP2O75695 350 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 PPP1R3DO95685 299 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 TGFAP01135 160 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 ATP6V1B2P21281 511 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 RBMXP38159 391 aaKnown RBP15.13■□□□□ 0.01
PNKP-230ENST00000638016 RAD52P43351 418 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 MXRA7P84157 204 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 FAM166AQ6J272 317 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 CYP2R1Q6VVX0 501 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 FITM2Q8N6M3 262 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 ZNF540Q8NDQ6 660 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 ABHD4Q8TB40 342 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 FNDC8Q8TC99 324 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 SLC7A6Q92536 515 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 TSSK2Q96PF2 358 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 GPX7Q96SL4 187 aaPredicted RBP15.13■□□□□ 0.01
PNKP-230ENST00000638016 OR2J1Q9GZK6 312 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
PNKP-230ENST00000638016 AURKCQ9UQB9 309 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 COA3Q9Y2R0 106 aaPredicted RBP15.13■□□□□ 0.01
PNKP-230ENST00000638016 CACNG2Q9Y698 323 aa15.13■□□□□ 0.01
PNKP-230ENST00000638016 DCTN6O00399 190 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 SLC16A7O60669 478 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 DCTN3O75935 186 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 GADD45GO95257 159 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 SDHAP31040 664 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 RRM2P31350 389 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 CDKN2AP42771 156 aaKnown RBP15.12■□□□□ 0.01
PNKP-230ENST00000638016 CHN2P52757 468 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 SRSF2Q01130 221 aaKnown RBP15.12■□□□□ 0.01
PNKP-230ENST00000638016 KRT72Q14CN4 511 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.12■□□□□ 0.01
PNKP-230ENST00000638016 RDH5Q92781 318 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 MARS2Q96GW9 593 aaKnown RBP15.12■□□□□ 0.01
PNKP-230ENST00000638016 NUAK2Q9H093 628 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 KCNS2Q9ULS6 477 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 TIMM10BQ9Y5J6 103 aa15.12■□□□□ 0.01
PNKP-230ENST00000638016 DOK2O60496 412 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 FABP3P05413 133 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 FAM157CP0CG43 387 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 GPR6P46095 362 aaPredicted RBP15.11■□□□□ 0.01
PNKP-230ENST00000638016 TSTQ16762 297 aaKnown RBP15.11■□□□□ 0.01
PNKP-230ENST00000638016 MEP1BQ16820 701 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 SPRNQ5BIV9 151 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 FAM120AOSQ5T036 256 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 C16orf89Q6UX73 402 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 CLDND2Q8NHS1 167 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 FANK1Q8TC84 345 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 KLF14Q8TD94 323 aaPredicted RBP15.11■□□□□ 0.01
PNKP-230ENST00000638016 SNX33Q8WV41 574 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 CCT8L2Q96SF2 557 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 BEX2Q9BXY8 128 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 SHARPINQ9H0F6 387 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 TMEM160Q9NX00 188 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 VSX1Q9NZR4 365 aaPredicted RBP15.11■□□□□ 0.01
PNKP-230ENST00000638016 CDC42EP3Q9UKI2 254 aa15.11■□□□□ 0.01
PNKP-230ENST00000638016 ZSCAN5BA6NJL1 495 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 C12orf71A8MTZ7 269 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 SPRY3O43610 288 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 OR10H3O60404 316 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 IGHV3-13P01766 116 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 ACHEP22303 614 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 GUCA1AP43080 201 aaPredicted RBP15.1■□□□□ 0.01
PNKP-230ENST00000638016 HTR5AP47898 357 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 MMP15P51511 669 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 PPP1CBP62140 327 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 AVPI1Q5T686 147 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 TMEM154Q6P9G4 183 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms