RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ABHD14AQ9BUJ0 271 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 COMMD4Q9H0A8 199 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 FAM234AQ9H0X4 552 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 NXF5Q9H1B4 397 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 CPVLQ9H3G5 476 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 IKZF5Q9H5V7 419 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ARMC7Q9H6L4 198 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ESRP2Q9H6T0 727 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 ALG9Q9H6U8 611 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 FKRPQ9H9S5 495 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SIAEQ9HAT2 523 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TXNRD2Q9NNW7 524 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 HMG20AQ9NP66 347 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 NIT2Q9NQR4 276 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SPANXB1Q9NS25 103 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 FGF21Q9NSA1 209 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TMEM74BQ9NUR3 256 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SLC25A37Q9NYZ2 338 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SIGLEC8Q9NYZ4 499 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TECRQ9NZ01 308 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 KLRF1Q9NZS2 232 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SLC9A2Q9UBY0 812 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 GLS2Q9UI32 602 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CD84Q9UIB8 345 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ZNF107Q9UII5 783 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 PURGQ9UJV8 347 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 ZNF223Q9UK11 482 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 DNAJC12Q9UKB3 198 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 PILRAQ9UKJ1 303 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 RALYQ9UKM9 306 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 FZR1Q9UM11 496 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 FZD1Q9UP38 647 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 C14orf166Q9Y224 244 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 ANGPT4Q9Y264 503 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 UFC1Q9Y3C8 167 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TMED3Q9Y3Q3 217 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ETV7Q9Y603 341 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 RIMS1Q86UR5 1692 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 DHX57Q6P158 1386 aaKnown RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 COL11A2P13942 1736 aaPredicted RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 RB1CC1Q8TDY2 1594 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 VPS8Q8N3P4 1428 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 WDR97A6NE52 1622 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 TGIF2-C20orf24A0A0A6YYL0 155 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 A0A1B0GU03 582 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ZCWPW2A0A1B0GU75 182 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 TINCRA0A1B0GVN0 87 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 IGSF23A1L1A6 192 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 FAM74A7A6NL05 159 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 CLDN24A6NM45 220 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 EVPLLA8MZ36 301 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 B5MCH6 92 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 SEC14L6B5MCN3 397 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ZNF878C9JN71 531 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ANKRD63C9JTQ0 380 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ANHXE9PGG2 379 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 G3V4G9 280 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 C15orf65H3BRN8 121 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 KCNK1O00180 336 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 GPR31O00270 319 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 PLPP1O14494 284 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 PRYO14603 147 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ZNF195O14628 629 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 RGS5O15539 181 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 CYB5BO43169 146 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 RAD51CO43502 376 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 SLC16A7O60669 478 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ALOX12BO75342 701 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 MPDU1O75352 247 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ATP5LO75964 103 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ANXA9O76027 345 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 IGSF6O95976 241 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 CA1P00915 261 aaPredicted RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 PDYNP01213 254 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 IGHG3P01860 377 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 BPGMP07738 259 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 NGFRP08138 427 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 H2BFMP0C1H6 154 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ACSM4P0C7M7 580 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 RFPL3SP0C7P2 107 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 SLC35G4P0C7Q5 338 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 METTL15P1P0C7V9 234 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ADORA3P0DMS8 318 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 LIPCP11150 499 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 FOLR1P15328 257 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 GATA1P15976 413 aaPredicted RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 H2AFXP16104 143 aaPredicted RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 NELFEP18615 380 aaKnown RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 PVALBP20472 110 aaPredicted RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 OMGP23515 440 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 FASP25445 335 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 ATP5A1P25705 553 aaKnown RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 DUTP33316 252 aaKnown RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 LEPP41159 167 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 GLP1RP43220 463 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 QARSP47897 775 aaKnown RBP2.62□□□□□ -1.99
VIM-210ENST00000637053 GCLMP48507 274 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 CYP2J2P51589 502 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 SGSHP51688 502 aa2.62□□□□□ -1.99
VIM-210ENST00000637053 PAX9P55771 341 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms