RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 PTX4Q96A99 478 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DMRTA2Q96SC8 542 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ZNF587Q96SQ5 575 aaPredicted RBP13.09□□□□□ -0.31
CLN6-215ENST00000636674 DNTTIP1Q9H147 329 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 CYB5R1Q9UHQ9 305 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 SLC22A13Q9Y226 551 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 NCOR1O75376 2440 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 A0A0D9SG52 128 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 LOC390937A0A1W2PQ73 354 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 TCRBV21S2A2A0A5A6 115 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 MEGF11A6BM72 1044 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 MEIS3P1A6NDR6 274 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 PRKNO60260 465 aaPredicted RBP13.08□□□□□ -0.31
CLN6-215ENST00000636674 ICOSLGO75144 302 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 NPIPB7O75200 414 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 SRSF10O75494 262 aaKnown RBP13.08□□□□□ -0.31
CLN6-215ENST00000636674 ZNF735P0CB33 412 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 RIDAP52758 137 aaKnown RBP13.08□□□□□ -0.31
CLN6-215ENST00000636674 INSM1Q01101 510 aaPredicted RBP13.08□□□□□ -0.31
CLN6-215ENST00000636674 BTN1A1Q13410 526 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 FAM122CQ6P4D5 195 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 SLC35D2Q76EJ3 337 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 ZNF321PQ8N8H1 164 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 OR5M8Q8NGP6 311 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 DVL3Q92997 716 aaPredicted RBP13.08□□□□□ -0.31
CLN6-215ENST00000636674 CHRNA10Q9GZZ6 450 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 UCK1Q9HA47 277 aa13.08□□□□□ -0.31
CLN6-215ENST00000636674 B4DGG1 531 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 H3BSH0 61 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 TSPAN4O14817 238 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 WDPCPO95876 746 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 PROS1P07225 676 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 FBXO45P0C2W1 286 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 THEGLP0DJG4 465 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 CD1CP29017 333 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 FASLGP48023 281 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 BLKP51451 505 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 DCAF7P61962 342 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 MFGE8Q08431 387 aaPredicted RBP13.08□□□□□ -0.32
CLN6-215ENST00000636674 ACKR1Q16570 336 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
CLN6-215ENST00000636674 PLPP7Q8NBV4 271 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 OR8S1Q8NH09 359 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 AIFM2Q9BRQ8 373 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 RTN4RQ9BZR6 473 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 C12orf4Q9NQ89 552 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 SLC2A8Q9NY64 477 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 XIRP2A4UGR9 3374 aa13.08□□□□□ -0.32
CLN6-215ENST00000636674 IGKV3D-11A0A0A0MRZ8 115 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 LILRA5A6NI73 299 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 ALG1L2C9J202 215 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 NUDT21O43809 227 aaKnown RBP13.07□□□□□ -0.32
CLN6-215ENST00000636674 DXOO77932 396 aaKnown RBP13.07□□□□□ -0.32
CLN6-215ENST00000636674 IGLV3-19P01714 112 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 HLA-DQA2P01906 255 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 RLN2P04090 185 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 ISG15P05161 165 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 SPARCP09486 303 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 SLC25A4P12235 298 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 MPZP25189 248 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 CAPZA1P52907 286 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 C1orf61Q13536 156 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 C1orf100Q5SVJ3 147 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 PHF19Q5T6S3 580 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 ATPAF1Q5TC12 328 aaPredicted RBP13.07□□□□□ -0.32
CLN6-215ENST00000636674 PARGQ86W56 976 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 LYPD6Q86Y78 171 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 GALNT16Q8N428 558 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 KCNRGQ8N5I3 272 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 ST8SIA2Q92186 375 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 ADOQ96SZ5 270 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 LRRC61Q9BV99 259 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 RASL12Q9NYN1 266 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 TAS2R4Q9NYW5 299 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 GPR160Q9UJ42 338 aa13.07□□□□□ -0.32
CLN6-215ENST00000636674 TMEM200CA6NKL6 621 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TMEM150CB9EJG8 249 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TO15178 435 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 HCRTR2O43614 444 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 DDAH2O95865 285 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 HLA-GP17693 338 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 PGCP20142 388 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 ACHEP22303 614 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 DLX2Q07687 328 aaPredicted RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 ZMYND11Q15326 602 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 C1QL3Q5VWW1 255 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 METTL27Q8N6F8 245 aaPredicted RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 FRMD1Q8N878 549 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 PXT1Q8NFP0 134 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 STEAP2Q8NFT2 490 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 STK35Q8TDR2 534 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 ZNF721Q8TF20 911 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 MRPS24Q96EL2 167 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms