RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 CMTM4Q8IZR5 234 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 NPEPL1Q8NDH3 523 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 NRIP3Q9NQ35 241 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 TRBV4-1A0A0J9YWV2 114 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 ERVFC1-1P60608 527 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 OXA1LQ15070 435 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 TMIGD2Q96BF3 282 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 ACY3Q96HD9 319 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 DCAF13Q9NV06 445 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 LOC100289279A0A1B0GTE1 492 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF749O43361 778 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 CPN1P15169 458 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 CLEC12BQ2HXU8 276 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 H3BVH4 76 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 NME4O00746 187 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 TNFSF11O14788 317 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 H2AFB1P0C5Y9 115 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 GLI4P10075 376 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 APEX1P27695 318 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 OR13C8Q8NGS7 320 aa16.12■□□□□ 0.17
CACNA1A-225ENST00000636389 AKR7A3O95154 331 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 RNASE1P07998 156 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 GUSBP08236 651 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF141Q15928 474 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 GFRALQ6UXV0 394 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 DPPA4Q7L190 304 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 FA2HQ7L5A8 372 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 ISCA2Q86U28 154 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 C3P01024 1663 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 SMAD6O43541 496 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 RAB38P57729 211 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 ANGPTL6Q8NI99 470 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 BRWD1Q9NSI6 2320 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 SEC16AO15027 2179 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 LY86O95711 162 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 TMEM123Q8N131 208 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 RTTNQ86VV8 2226 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 TRAV36DV7A0A075B6V5 113 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 FABP7O15540 132 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 C12orf42Q96LP6 360 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 FGF4P08620 206 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 SYPL1Q16563 259 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 LEXMQ3ZCV2 418 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 OR2G6Q5TZ20 316 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 PIWIL3Q7Z3Z3 882 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 ARHGEF39Q8N4T4 335 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 OR51F2Q8NH61 342 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 RPUSD4Q96CM3 377 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 HELTA6NFD8 242 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 PDGFBP01127 241 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 CD1BP29016 333 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 NPWQ8N729 165 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF239Q16600 458 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 HNRNPA1L2Q32P51 320 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 FBXO46Q6PJ61 603 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 GLIPR1L1Q6UWM5 242 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 GDPGP1Q6ZNW5 385 aa16.11■□□□□ 0.17
CACNA1A-225ENST00000636389 HBA1P69905 142 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 CMBLQ96DG6 245 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 CTSFQ9UBX1 484 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 RAB22AQ9UL26 194 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF85Q03923 595 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 C2CD4CQ8TF44 421 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 NUMBLQ9Y6R0 609 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 WDR1O75083 606 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ETV6P41212 452 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF691Q5VV52 312 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ROBO4Q8WZ75 1007 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ACTR3CQ9C0K3 210 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF696Q9H7X3 374 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 SRMP19623 302 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 GDNFP39905 211 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 TPPP2P59282 170 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 TAS2R60P59551 318 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ZNF816Q0VGE8 651 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 FOXC1Q12948 553 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 PXDC1Q5TGL8 231 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 HSD17B13Q7Z5P4 300 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 SLC30A3Q99726 388 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 MUTYHQ9UIF7 546 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 FGF7P21781 194 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 MRPL10Q7Z7H8 261 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 FBXL14Q8N1E6 418 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 SERINC4A6NH21 518 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 SELENOFO60613 162 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 NKX2-1P43699 371 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 HNRNPA3P51991 378 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 MRPS21P82921 87 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 SARGQ9BW04 601 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 IGSF5Q9NSI5 407 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ADAM29Q9UKF5 820 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 POMT1Q9Y6A1 747 aa16.1■□□□□ 0.17
CACNA1A-225ENST00000636389 ARID1AO14497 2285 aa16.09■□□□□ 0.17
CACNA1A-225ENST00000636389 DGAT2L7PQ6IED9 249 aa16.09■□□□□ 0.17
CACNA1A-225ENST00000636389 MKRN2Q9H000 416 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-225ENST00000636389 IGHV3-15A0A0B4J1V0 119 aa16.09■□□□□ 0.17
CACNA1A-225ENST00000636389 OR2T7P0C7T2 308 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms