RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	ATP5I	P56385	69 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CCDC173	Q0VFZ6	552 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PON2	Q15165	354 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HADH	Q16836	314 aa	Known RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NSUN5P1	Q3KNT7	163 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PRAMEF5	Q5TYX0	476 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PRAMEF6	Q5VXH4	476 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SYPL2	Q5VXT5	272 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	WDR59	Q6PJI9	974 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	WDR74	Q6RFH5	385 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ENPP6	Q6UWR7	440 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	UNQ9370/PRO34162	Q6UXP9	181 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TPGS1	Q6ZTW0	290 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SETD3	Q86TU7	594 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TAC4	Q86UU9	113 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PPP1R27	Q86WC6	154 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TMEM25	Q86YD3	366 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	EGFL6	Q8IUX8	553 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	UBE2J2	Q8N2K1	259 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZPLD1	Q8TCW7	415 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SETD7	Q8WTS6	366 aa	Known RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RXFP2	Q8WXD0	754 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NDRG1	Q92597	394 aa	Known RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FGGY	Q96C11	551 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PGLYRP4	Q96LB8	373 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ANKRD19P	Q9H560	264 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TMEM9	Q9P0T7	183 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	KLHL21	Q9UJP4	597 aa		4.4	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PATJ	Q8NI35	1801 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ANAPC1	Q9H1A4	1944 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TCRBV9S1A1T	A0A576	114 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TBL1X	O60907	577 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZNF189	O75820	626 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	STAMBP	O95630	424 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	KRT7	P08729	469 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CCDC166	P0CW27	439 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SLC1A1	P43005	524 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HCAR3	P49019	387 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PLK1	P53350	603 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	BCL2L1	Q07817	233 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ANGPT1	Q15389	498 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CCDC14	Q49A88	953 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PRR30	Q53SZ7	412 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MOB1B	Q7L9L4	216 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CD177	Q8N6Q3	437 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TMEM105	Q8N8V8	129 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CCDC112	Q8NEF3	446 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR2L3	Q8NG85	312 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FAM172A	Q8WUF8	416 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RAPGEF5	Q92565	580 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MCEE	Q96PE7	176 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CCDC77	Q9BR77	488 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PKIB	Q9C010	78 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZYG11B	Q9C0D3	744 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	REEP4	Q9H6H4	257 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NIPAL2	Q9H841	368 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PISD	Q9UG56	409 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR12D3	Q9UGF7	316 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	GGA2	Q9UJY4	613 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RAB23	Q9ULC3	237 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MMP17	Q9ULZ9	603 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SCML1	Q9UN30	329 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	VCAN	P13611	3396 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PIEZO1	Q92508	2521 aa		4.39	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HCFC1	P51610	2035 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	IGLV3-10	A0A075B6K4	115 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392		A0A087X0T9	212 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392		K7EQS6	105 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	LCA5L	O95447	670 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	DCN	P07585	359 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RHOC	P08134	193 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PLEK	P08567	350 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CISD3	P0C7P0	127 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FAM228B	P0C875	321 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR1E1	P30953	314 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CALCR	P30988	508 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MAGEA1	P43355	309 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TPMT	P51580	245 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HADHB	P55084	474 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PDK2	Q15119	407 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PARP15	Q460N3	678 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FBXL22	Q6P050	247 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	BZW1	Q7L1Q6	419 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NRM	Q8IXM6	262 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CEND1	Q8N111	149 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	LINC00612	Q8N6U2	182 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SDR9C7	Q8NEX9	313 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TSTD1	Q8NFU3	115 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR1L6	Q8NGR2	347 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CLCC1	Q96S66	551 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FMO2	Q99518	471 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	GABRG3	Q99928	467 aa		4.38	□□□□□ -1.71

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