RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 LIME1Q9H400 295 aa16.83■□□□□ 0.28
CROCCP4-202ENST00000633627 MED20Q9H944 212 aa16.83■□□□□ 0.28
CROCCP4-202ENST00000633627 MRPL22Q9NWU5 206 aaKnown RBP16.83■□□□□ 0.28
CROCCP4-202ENST00000633627 TVP23BQ9NYZ1 205 aa16.83■□□□□ 0.28
CROCCP4-202ENST00000633627 MOKQ9UQ07 419 aa16.83■□□□□ 0.28
CROCCP4-202ENST00000633627 TIMM10BQ9Y5J6 103 aa16.83■□□□□ 0.28
CROCCP4-202ENST00000633627 DSCAMO60469 2012 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 IGHV2OR16-5A0A0B4J2B6 119 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 E9PQ18 207 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 ATP6V1G2-DDX39BF2Z307 99 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 HS3ST1O14792 307 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 CRYAAP02489 173 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 GYPBP06028 91 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 CENPAP49450 140 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 PCBD1P61457 104 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 SNAPC1Q16533 368 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 MEP1BQ16820 701 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 ZNF672Q499Z4 452 aaPredicted RBP16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 LINC01590Q5TEZ4 76 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 SLC22A25Q6T423 547 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 B3GLCTQ6Y288 498 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 CPEB3Q8NE35 698 aaKnown RBP16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 PROKR2Q8NFJ6 384 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 OR51L1Q8NGJ5 315 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 AKAP1Q92667 903 aaKnown RBP eCLIP16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 EME1Q96AY2 570 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 OR2H1Q9GZK4 316 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 WNT5BQ9H1J7 359 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 CCNB1IP1Q9NPC3 277 aa16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 HINT3Q9NQE9 182 aaKnown RBP16.82■□□□□ 0.28
CROCCP4-202ENST00000633627 ZNF35P13682 527 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 RAD23AP54725 363 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 TEKQ02763 1124 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 HGFACQ04756 655 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 AQP6Q13520 282 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 CPOQ8IVL8 374 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 ZNF611Q8N823 705 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 RIBC2Q9H4K1 309 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 ASH2LQ9UBL3 628 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 LHFPL6Q9Y693 200 aa16.81■□□□□ 0.28
CROCCP4-202ENST00000633627 CSMD2Q7Z408 3487 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 CCDC168Q8NDH2 2452 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 E7EQL1 145 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PRR23D1E9PI22 279 aaPredicted RBP16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PTHP01270 115 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PRR23D2P0DMB1 279 aaPredicted RBP16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PAICSP22234 425 aaKnown RBP16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 GGT2P36268 569 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 CDH11P55287 796 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 HIST1H3AP68431 136 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PLP2Q04941 152 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 SCRN3Q0VDG4 424 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 HIST2H3PS2Q5TEC6 136 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PLBD1Q6P4A8 553 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 LYPD4Q6UWN0 246 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 HIST2H3AQ71DI3 136 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 DEPDC4Q8N2C3 294 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 AKR7LQ8NHP1 331 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 KCNS3Q9BQ31 491 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 GRIP2Q9C0E4 1043 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 C1orf198Q9H425 327 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 DCLRE1BQ9H816 532 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 UBTD1Q9HAC8 227 aa16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 CISD1Q9NZ45 108 aaKnown RBP16.8■□□□□ 0.28
CROCCP4-202ENST00000633627 IQCMA0A1B0GVH7 501 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 PRKYO43930 277 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 SLC2A5P22732 501 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 APEX1P27695 318 aaKnown RBP16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 FMO3P31513 532 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 BLVRAP53004 296 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 ZNF774Q6NX45 483 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 PAMR1Q6UXH9 720 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 ZNF511Q8NB15 262 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 SLC30A7Q8NEW0 376 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 IGFBPL1Q8WX77 278 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 PRRG3Q9BZD7 231 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 CYB5R1Q9UHQ9 305 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 KCNG2Q9UJ96 466 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 ORC6Q9Y5N6 252 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 COMMD3-BMI1R4GMX3 469 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 CSMD1Q96PZ7 3565 aa16.79■□□□□ 0.28
CROCCP4-202ENST00000633627 LOC100509620A0A075B734 347 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 TVP23AA6NH52 213 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 M0R129 80 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 CASQ2O14958 399 aaPredicted RBP16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 SGCEO43556 437 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 GLCEO94923 617 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 HLA-DQA2P01906 255 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 NKX6-1P78426 367 aaPredicted RBP16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 TRIP10Q15642 601 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 PCK2Q16822 640 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 ZIK1Q3SY52 487 aaPredicted RBP16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 CCDC92Q53HC0 331 aaPredicted RBP16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 LPCAT4Q643R3 524 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 SLC18B1Q6NT16 456 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 C20orf204Q6ZNR8 217 aa16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 VASH1Q7L8A9 365 aaPredicted RBP16.78■□□□□ 0.28
CROCCP4-202ENST00000633627 CXXC5Q7LFL8 322 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms