RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SF3B5Q9BWJ5 86 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 EXOSC4Q9NPD3 245 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 LAMP5Q9UJQ1 280 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 ING1Q9UK53 422 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 COA3Q9Y2R0 106 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 LIPGQ9Y5X9 500 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 FREM1Q5H8C1 2179 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 TRGV8A0A0C4DH27 118 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 PHYHO14832 338 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 WISP2O76076 250 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ABHD16AO95870 558 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 WNT11O96014 354 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 GAAP10253 952 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 PMP22Q01453 160 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 GPR50Q13585 617 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 INSL4Q14641 139 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 TP53I3Q53FA7 332 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 USP43Q70EL4 1123 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 CREB3L2Q70SY1 520 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 VASH1Q7L8A9 365 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 DPY19L4Q7Z388 723 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 MRGPRGQ86SM5 289 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 MEIOBQ8N635 442 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 KBTBD8Q8NFY9 601 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC26A10Q8NG04 563 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 OR9K2Q8NGE7 335 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ITLN2Q8WWU7 325 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 TMEM203Q969S6 136 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF845Q96IR2 970 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 TM9SF2Q99805 663 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ACKR4Q9NPB9 350 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ST6GALNAC2Q9UJ37 374 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 GNG8Q9UK08 70 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 SSR3Q9UNL2 185 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 GRIP1Q9Y3R0 1128 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ARHGAP21Q5T5U3 1957 aa8.41□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF716A6NP11 495 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 PSMD9O00233 223 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 CCL21O00585 134 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF432O94892 652 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 COX6B1P14854 86 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF708P17019 499 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ALOX5APP20292 161 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 CA7P43166 264 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 GBX2P52951 348 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 TUBA1BP68363 451 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ADAM8P78325 824 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 FABP5Q01469 135 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 PHYHD1Q5SRE7 291 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 CARD17Q5XLA6 110 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ABLIM2Q6H8Q1 611 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 LRFN4Q6PJG9 635 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 PLXDC2Q6UX71 529 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 PLEKHG7Q6ZR37 379 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 TUBA1AQ71U36 451 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 FAM220AQ7Z4H9 259 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 KCTD20Q7Z5Y7 419 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 TMEM123Q8N131 208 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 OTOSQ8NHW6 89 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 RPS4Y2Q8TD47 263 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ABTB1Q969K4 478 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 PGLYRP3Q96LB9 341 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 DCSTAMPQ9H295 470 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 LDAHQ9H6V9 325 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ZDHHC11Q9H8X9 412 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ACOXLQ9NUZ1 547 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 PAQR5Q9NXK6 330 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 KCNG2Q9UJ96 466 aa8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF593O00488 134 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 PLPP2O43688 288 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 UPK3AO75631 287 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 ACTL6AO96019 429 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 HLA-DPB1P04440 258 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 SPARCP09486 303 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 TACSTD2P09758 323 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF823P16415 610 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 UGT2B10P36537 528 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 SERPINB10P48595 397 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 ENTPD1P49961 510 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 SRYQ05066 204 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 BCL2A1Q16548 175 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 PCK2Q16822 640 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 DGUOKQ16854 277 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 KRTCAP3Q53RY4 240 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 DMKNQ6E0U4 476 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 TMEM91Q6ZNR0 172 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 GLB1L2Q8IW92 636 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 NEIL3Q8TAT5 605 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 HAVCR2Q8TDQ0 301 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 THEM6Q8WUY1 208 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 ROBO4Q8WZ75 1007 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 HSD17B8Q92506 261 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 NSMAFQ92636 917 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 DACH2Q96NX9 599 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 OR2M2Q96R28 347 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 TAAR6Q96RI8 345 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 COQ7Q99807 217 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms