RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 DGCR6Q14129 220 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 EFNB3Q15768 340 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 HIST3H3Q16695 136 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 TBC1D28Q2M2D7 210 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MST1LQ2TV78 715 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 C10orf128Q5T292 105 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 ARMC4Q5T2S8 1044 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 PODNL1Q6PEZ8 512 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 UNQ6126/PRO20091Q6UXV3 157 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 TMPRSS11FQ6ZWK6 438 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MYPOPQ86VE0 399 aaPredicted RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 IGFN1Q86VF2 1251 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MEX3DQ86XN8 651 aaKnown RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 WDFY1Q8IWB7 410 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SVOPLQ8N434 492 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 ZNF525Q8N782 197 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MAPK1IP1LQ8NDC0 245 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SLC30A7Q8NEW0 376 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 OR13C2Q8NGS9 318 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 OR52J3Q8NH60 311 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SLC7A13Q8TCU3 470 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 NEU4Q8WWR8 484 aaPredicted RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 HDAC2Q92769 488 aaKnown RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 NSL1Q96IY1 281 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 PIMREGQ9BSJ6 248 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 SIAEQ9HAT2 523 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 MYOZ1Q9NP98 299 aaPredicted RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 MAN2C1Q9NTJ4 1040 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 NDUFAF4Q9P032 175 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 EIF3KQ9UBQ5 218 aaKnown RBP5.52□□□□□ -1.53
TCF4-249ENST00000625716 SLC7A8Q9UHI5 535 aa5.52□□□□□ -1.53
TCF4-249ENST00000625716 IGHV4-30-2A0A087WSY4 118 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 A0A1W2PPW3 197 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 LOC390937A0A1W2PQ73 354 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 C12orf71A8MTZ7 269 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 M0R233 179 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 NDUFS8O00217 210 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 AHCYL1O43865 530 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 OR10H3O60404 316 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 DIRAS1O95057 198 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 PRSS23O95084 383 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 IGHMP01871 453 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 LCKP06239 509 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 CD14P08571 375 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ADRA2AP08913 450 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ZNF35P13682 527 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 CALB2P22676 271 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 PCSK6P29122 969 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 CDAP32320 146 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 GLRXP35754 106 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 EVX1P49640 407 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 GDI2P50395 445 aaKnown RBP5.51□□□□□ -1.53
TCF4-249ENST00000625716 RPS6KA3P51812 740 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 VLDLRP98155 873 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 FMODQ06828 376 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 MOGQ16653 247 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 IQCCQ4KMZ1 466 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 GPR139Q6DWJ6 353 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 RGS7BPQ6MZT1 257 aaPredicted RBP5.51□□□□□ -1.53
TCF4-249ENST00000625716 SLC25A47Q6Q0C1 308 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ARHGAP24Q8N264 748 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 FITM2Q8N6M3 262 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ARIH2OSQ8N7S6 290 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ICA1LQ8NDH6 482 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ZNF540Q8NDQ6 660 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 OR10H5Q8NGA6 315 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 C11orf40Q8WZ69 217 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 POP5Q969H6 163 aaKnown RBP5.51□□□□□ -1.53
TCF4-249ENST00000625716 MRPL24Q96A35 216 aaKnown RBP5.51□□□□□ -1.53
TCF4-249ENST00000625716 RSRC1Q96IZ7 334 aaKnown RBP5.51□□□□□ -1.53
TCF4-249ENST00000625716 C7orf34Q96L11 122 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ZNF570Q96NI8 536 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 SORCS2Q96PQ0 1159 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 TSPAN32Q96QS1 320 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 SEPHS2Q99611 448 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 SYT3Q9BQG1 590 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 CDADC1Q9BWV3 514 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 BCL2L14Q9BZR8 327 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 MS4A5Q9H3V2 200 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 RERGLQ9H628 205 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 YAE1D1Q9NRH1 226 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 ZNF224Q9NZL3 707 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 CD300AQ9UGN4 299 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 TIMM10BQ9Y5J6 103 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 AKAP9Q99996 3911 aa5.51□□□□□ -1.53
TCF4-249ENST00000625716 HRNRQ86YZ3 2850 aaPredicted RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 MED13LQ71F56 2210 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 TEX13CA0A0J9YWL9 993 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 TRBV4-1A0A0J9YWV2 114 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 H7C1C5 153 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 CDC42EP2O14613 210 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SYNGR3O43761 229 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 TLX2O43763 284 aaPredicted RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 CD5LO43866 347 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 GPRIN2O60269 458 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 PTP4A3O75365 173 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 KRT36O76013 467 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 LY6HO94772 140 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms