RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 LIPHQ8WWY8 451 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 POP5Q969H6 163 aaKnown RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 TRIM44Q96DX7 344 aaPredicted RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 CGREF1Q99674 301 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 PATZ1Q9HBE1 687 aaKnown RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 CCNB1IP1Q9NPC3 277 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 TMEM106BQ9NUM4 274 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 PLEK2Q9NYT0 353 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 INSIG2Q9Y5U4 225 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 AUP1Q9Y679 476 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 IGHV3OR16-10A0A075B7F0 116 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 PLSCR5A0PG75 271 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 MCIDASD6RGH6 385 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 PIP5K1CO60331 668 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 FOXH1O75593 365 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 IGHMP01871 453 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 MT-ND5P03915 603 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 RNASE1P07998 156 aaKnown RBP9.28□□□□□ -0.92
DDX41-218ENST00000625286 PCGF2P35227 344 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 GDI2P50395 445 aaKnown RBP9.28□□□□□ -0.92
DDX41-218ENST00000625286 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
DDX41-218ENST00000625286 PAX8Q06710 450 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 BAMBIQ13145 260 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 FOXL2NBQ6ZUU3 175 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 CCDC80Q76M96 950 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 CROCCP2Q86T23 111 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 LRRC75AQ8NAA5 344 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 OR10A6Q8NH74 314 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 DACT3Q96B18 629 aaPredicted RBP9.28□□□□□ -0.92
DDX41-218ENST00000625286 SGTBQ96EQ0 304 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 C4orf45Q96LM5 186 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 EGLN1Q9GZT9 426 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 TXNIPQ9H3M7 391 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 SMURF2Q9HAU4 748 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 EIF3KQ9UBQ5 218 aaKnown RBP9.28□□□□□ -0.92
DDX41-218ENST00000625286 RIMS3Q9UJD0 308 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 ZDHHC8Q9ULC8 765 aa9.28□□□□□ -0.92
DDX41-218ENST00000625286 MDFIC2A0A1B0GVS7 189 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 A8MXK9 166 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 FBP2O00757 339 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 CST2P09228 141 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 WNT2P09544 360 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 MDKP21741 143 aaPredicted RBP9.27□□□□□ -0.93
DDX41-218ENST00000625286 OMGP23515 440 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 OR1E2P47887 323 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 DAP3P51398 398 aaKnown RBP9.27□□□□□ -0.93
DDX41-218ENST00000625286 SLC3A1Q07837 685 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 VMACQ2NL98 169 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 TMEM155Q4W5P6 130 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 ARMCX4Q5H9R4 360 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 MTX3Q5HYI7 312 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 OTPQ5XKR4 325 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 LEG1Q6P5S2 330 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 PATL1Q86TB9 770 aaKnown RBP9.27□□□□□ -0.93
DDX41-218ENST00000625286 IGFN1Q86VF2 1251 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 ST7LQ8TDW4 575 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 TMEM239Q8WW34 195 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
DDX41-218ENST00000625286 SAMD8Q96LT4 415 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 CYSLTR2Q9NS75 346 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 STARD10Q9Y365 291 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 SH3GLB1Q9Y371 365 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 TIMM10BQ9Y5J6 103 aa9.27□□□□□ -0.93
DDX41-218ENST00000625286 NPIPB13A6NJU9 1138 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 NPIPB4C9JG80 1138 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 CLDN34H7C241 214 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 ZNF205O95201 554 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 IGF2P01344 180 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 THRBP10828 461 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 ZNF26P17031 533 aaPredicted RBP9.26□□□□□ -0.93
DDX41-218ENST00000625286 LIPAP38571 399 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 RBM34P42696 430 aaKnown RBP9.26□□□□□ -0.93
DDX41-218ENST00000625286 BTG1P62324 171 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 CD47Q08722 323 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 TOP3AQ13472 1001 aaPredicted RBP9.26□□□□□ -0.93
DDX41-218ENST00000625286 RABL3Q5HYI8 236 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 NANOGP8Q6NSW7 305 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 RBMS3Q6XE24 437 aaKnown RBP9.26□□□□□ -0.93
DDX41-218ENST00000625286 CALHM3Q86XJ0 350 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 TREML1Q86YW5 311 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 OR2Z1Q8NG97 314 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 ITLN1Q8WWA0 313 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 SLC7A6Q92536 515 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 CMBLQ96DG6 245 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 DIRC2Q96SL1 478 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 KCNN2Q9H2S1 579 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 EMC7Q9NPA0 242 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 HIF3AQ9Y2N7 669 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 NDUFAF1Q9Y375 327 aa9.26□□□□□ -0.93
DDX41-218ENST00000625286 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 CEACAM18A8MTB9 384 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 TMEM178BH3BS89 294 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 H3BSA7 217 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 H7C1C5 153 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 TIMM8AO60220 97 aaPredicted RBP9.25□□□□□ -0.93
DDX41-218ENST00000625286 OR5F1O95221 314 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 GPANK1O95872 356 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 PLATP00750 562 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 KITLGP21583 273 aa9.25□□□□□ -0.93
DDX41-218ENST00000625286 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms