RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 IL34Q6ZMJ4 242 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ZSCAN1Q8NBB4 408 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 OR10R2Q8NGX6 335 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 CASTOR1Q8WTX7 329 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 RSPRY1Q96DX4 576 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 MOGAT1Q96PD6 335 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 NRIP2Q9BQI9 281 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 ZNF251Q9BRH9 671 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 IL23AQ9NPF7 189 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 CYTL1Q9NRR1 136 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 RCC2Q9P258 522 aaKnown RBP12.73□□□□□ -0.37
LDB3-209ENST00000623056 SHPKQ9UHJ6 478 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 HIF3AQ9Y2N7 669 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 TMED7Q9Y3B3 224 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 COLEC10Q9Y6Z7 277 aa12.73□□□□□ -0.37
LDB3-209ENST00000623056 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 HIDE1A8MVS5 230 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 CSTAP01040 98 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 CRHP06850 196 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 FOLR2P14207 255 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 PSMB6P28072 239 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 TACR3P29371 465 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ADPRHP54922 357 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 NAAAQ02083 359 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 MEF2DQ14814 521 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 OTPQ5XKR4 325 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ZNF584Q8IVC4 421 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 THRSPQ92748 146 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 PPP1R14AQ96A00 147 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 PRRT1Q99946 306 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 CHMP1AQ9HD42 196 aaPredicted RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 CGGBP1Q9UFW8 167 aaPredicted RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 ZNF107Q9UII5 783 aaPredicted RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 KCNG2Q9UJ96 466 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 SLC22A13Q9Y226 551 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 SLC17A4Q9Y2C5 497 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 SPACA6W5XKT8 324 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 EML2O95834 649 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 CBR1P16152 277 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ADAM8P78325 824 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ZNHIT3Q15649 155 aaPredicted RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 ZNF74Q16587 644 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 GAB4Q2WGN9 574 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 CDNFQ49AH0 187 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 MESTQ5EB52 335 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 TMEM225Q6GV28 225 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 MISPQ8IVT2 679 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 BADQ92934 168 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 INTS14Q96SY0 518 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
LDB3-209ENST00000623056 SLC2A8Q9NY64 477 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 SERGEFQ9UGK8 458 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 GTF2A1LQ9UNN4 478 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 TMEM14AQ9Y6G1 99 aa12.72□□□□□ -0.37
LDB3-209ENST00000623056 ICOSLGO75144 302 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 S100A8P05109 93 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 S100A9P06702 114 aaKnown RBP12.71□□□□□ -0.37
LDB3-209ENST00000623056 MUC1P15941 1255 aaPredicted RBP12.71□□□□□ -0.37
LDB3-209ENST00000623056 VAMP1P23763 118 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 RNASE10Q5GAN6 216 aaKnown RBP12.71□□□□□ -0.37
LDB3-209ENST00000623056 FDX2Q6P4F2 183 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 GRASPQ7Z6J2 395 aaPredicted RBP12.71□□□□□ -0.37
LDB3-209ENST00000623056 RCBTB1Q8NDN9 531 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 FLVCR1-AS1Q8TAF5 88 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 RRNAD1Q96FB5 475 aaKnown RBP12.71□□□□□ -0.37
LDB3-209ENST00000623056 SRMSQ9H3Y6 488 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 GRHPRQ9UBQ7 328 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 DTX4Q9Y2E6 619 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 HEBP2Q9Y5Z4 205 aa12.71□□□□□ -0.37
LDB3-209ENST00000623056 MRPS18BQ9Y676 258 aaKnown RBP12.71□□□□□ -0.37
LDB3-209ENST00000623056 C13orf42A0A1B0GVH6 325 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 FITM1A5D6W6 292 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 C5orf51A6NDU8 294 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 HSPB2A8KAH6 182 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 OR10H2O60403 315 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 TXNDC12O95881 172 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 VIPR2P41587 438 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 ENPP2Q13822 863 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 GPR18Q14330 331 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 HSPB2Q16082 182 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 OR10K2Q6IF99 312 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 ZDHHC22Q8N966 263 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 ADAD2Q8NCV1 583 aaKnown RBP12.71□□□□□ -0.38
LDB3-209ENST00000623056 TCEAL3Q969E4 200 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 TSPAN32Q96QS1 320 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 HRH4Q9H3N8 390 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms