RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MPIG6BO95866 241 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SLC2A5P22732 501 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TUBG1P23258 451 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 AVPR2P30518 371 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 CAPZA1P52907 286 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 POU4F2Q12837 409 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ARHGAP11BQ3KRB8 267 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 IGSF11Q5DX21 431 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 KRBOX4Q5JUW0 171 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 PUSL1Q8N0Z8 303 aaKnown RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM52Q8NDY8 209 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 STEAP2Q8NFT2 490 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 OR13C3Q8NGS6 347 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SLC22A8Q8TCC7 542 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ADOQ96SZ5 270 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ZFYVE21Q9BQ24 234 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 DNTTIP1Q9H147 329 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 SCPEP1Q9HB40 452 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 KLHDC2Q9Y2U9 406 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ENTPD2Q9Y5L3 495 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 RNF215Q9Y6U7 377 aa6.32□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF318Q5VUA4 2279 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 RD3LP0DJH9 198 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CXADRP78310 365 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 FAM53BQ14153 422 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 RBM39Q14498 530 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 NSDHLQ15738 373 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 DEFB133Q30KQ1 61 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CHRFAM7AQ494W8 412 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 TMPRSS11FQ6ZWK6 438 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 OR2L13Q8N349 312 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 C12orf45Q8N5I9 185 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CCL4L1Q8NHW4 92 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 TOMM40LQ969M1 308 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 FAM71F1Q96KD3 344 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 MRGPRX1Q96LB2 322 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SCGB3A2Q96PL1 93 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 PLA2G2FQ9BZM2 168 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 FANCFQ9NPI8 374 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SLC22A11Q9NSA0 550 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 FRRS1LQ9P0K9 344 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF337Q9Y3M9 751 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 COL4A3Q01955 1670 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ALOX12BO75342 701 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 AKR7A3O95154 331 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 EML2O95834 649 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 KLK3P07288 261 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 OR4E1P0C645 316 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 NFYBP25208 207 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 GPR85P60893 370 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 HERV-K104P61576 105 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 DMRTC1Q5HYR2 192 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 STEAP1BQ6NZ63 245 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 KIRREL2Q6UWL6 708 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 BAIAP2L2Q6UXY1 529 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 VN1R4Q7Z5H5 301 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 HSD17B13Q7Z5P4 300 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 RNF113BQ8IZP6 322 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 OR1J2Q8NGS2 313 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 OR10R2Q8NGX6 335 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 MAFAQ8NHW3 353 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 FAM174AQ8TBP5 190 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 GAL3ST3Q96A11 431 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 MIB2Q96AX9 1013 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 VDAC3Q9Y277 283 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SPTBN2O15020 2390 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 NCOR1O75376 2440 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF106Q9H2Y7 1883 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 LRRK1Q38SD2 2015 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SNRPGP15A8MWD9 76 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SULT1C2O00338 296 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CTDSPLO15194 276 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 BCAT2O15382 392 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 P2RX6O15547 441 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 MBTPS2O43462 519 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 HLA-AP01891 365 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CNR1P21554 472 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 PEBP1P30086 187 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 BDKRB2P30411 391 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CDKN2AP42771 156 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CSNK1EP49674 416 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ATP1B3P54709 279 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 SPOCK1Q08629 439 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 KIR2DS3Q14952 304 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ELFN2Q5R3F8 820 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 TCEAL6Q6IPX3 200 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 OR2W3Q7Z3T1 314 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF565Q8N9K5 539 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 LILRB1Q8NHL6 650 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 GPR148Q8TDV2 347 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 PPP1R1CQ8WVI7 109 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 S100PBPQ96BU1 408 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 CRB3Q9BUF7 120 aa6.31□□□□□ -1.4
NEDD9-216ENST00000620854 ESRP2Q9H6T0 727 aaKnown RBP6.31□□□□□ -1.4
NEDD9-216ENST00000620854 WDR76Q9H967 626 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms