RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 FAM46BQ96A09 425 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SMIM19Q96E16 107 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 BEX2Q9BXY8 128 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 TMEM200CA6NKL6 621 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 ZFPL1O95159 310 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 IL7P13232 177 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 B4GALT1P15291 398 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 EFNB1P98172 346 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SFXN4Q6P4A7 337 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 FCRLAQ7L513 359 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 PLPP7Q8NBV4 271 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 OTOSQ8NHW6 89 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 CHPT1Q8WUD6 406 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 HOXB13Q92826 284 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SIGLEC12Q96PQ1 595 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 BEX1Q9HBH7 125 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 KLHDC2Q9Y2U9 406 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 VAMP5O95183 116 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 RAB40ALP0C0E4 278 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 CNR1P21554 472 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 BAK1Q16611 211 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF181Q2M3W8 571 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 FAM205BPQ63HN1 556 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 LINC00114Q6XXX2 140 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SULF2Q8IWU5 870 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF385AQ96PM9 386 aaKnown RBP14.05□□□□□ -0.16
CPSF1-213ENST00000620219 ANGPTL4Q9BY76 406 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 E9PQ18 207 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 RER1O15258 196 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 GPRIN2O60269 458 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 KLK2P20151 261 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 MAP2K6P52564 334 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SLC25A1P53007 311 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 Q499Y3 187 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 THEM4Q5T1C6 240 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF679Q8IYX0 411 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 CELF2-AS1Q8N7Q2 184 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 OR13C9Q8NGT0 318 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 OR2G2Q8NGZ5 317 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 KCNE4Q8WWG9 221 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SLC7A6Q92536 515 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 DMRTB1Q96MA1 342 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 LOC102723996A0A087X1L8 192 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 OR5H15A6NDH6 313 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 GUSBP08236 651 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 GAS1P54826 345 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 STK11Q15831 433 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 GLT8D1Q68CQ7 371 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 TMEM91Q6ZNR0 172 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 MIB2Q96AX9 1013 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 PTDSS2Q9BVG9 487 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 V9GY05 133 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 SPTBN4Q9H254 2564 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 SHISA3A0PJX4 238 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 MRPS15P82914 257 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 PLP2Q04941 152 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 SYS1Q8N2H4 156 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 OR2M7Q8NG81 312 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 FNDC9Q8TBE3 224 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 ABHD3Q8WU67 409 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 OR52A1Q9UKL2 312 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 FBXL3Q9UKT7 428 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 RBMX2Q9Y388 322 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 A0A087WV48 116 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 ITGB2P05107 769 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 FKBP2P26885 142 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 UQCRC1P31930 480 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 HTR5AP47898 357 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 SELENOPP49908 381 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 CBX3Q13185 183 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 GCNT2Q8N0V5 402 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 CRLF2Q9HC73 371 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 MRPS18AQ9NVS2 196 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 DXOO77932 396 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 SRMP19623 302 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 PRSS12P56730 875 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 CD300CQ08708 224 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 SLC17A1Q14916 467 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 ZADH2Q8N4Q0 377 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 NOXO1Q8NFA2 376 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 MCHR2Q969V1 340 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 ATG5Q9H1Y0 275 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 PPIL3Q9H2H8 161 aaKnown RBP14.04□□□□□ -0.16
CPSF1-213ENST00000620219 GLTPQ9NZD2 209 aa14.04□□□□□ -0.16
CPSF1-213ENST00000620219 NCOR2Q9Y618 2525 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 TMEM212A6NML5 194 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 MS4A18H0YCH9 400 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 ZNHIT1O43257 154 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 UCHL1P09936 223 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 MS4A18Q3C1V0 323 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 JMJD6Q6NYC1 403 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF585AQ6P3V2 769 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF704Q6ZNC4 412 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-213ENST00000620219 DND1Q8IYX4 353 aaKnown RBP14.03□□□□□ -0.16
CPSF1-213ENST00000620219 OR52N5Q8NH56 324 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 ASB10Q8WXI3 467 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 SPACA5Q96QH8 159 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 AMELYQ99218 206 aa14.03□□□□□ -0.16
CPSF1-213ENST00000620219 DIABLOQ9NR28 239 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms