RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PPIAL4DF5H284 164 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 J3QW42 95 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 XKRYO14609 159 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 SURF4O15260 269 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 SHOX2O60902 331 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 IGHV2-5P01817 119 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 CD55P08174 381 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PPIAL4FP0DN26 164 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TNFRSF1AP19438 455 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TNFRSF1BP20333 461 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 CPT2P23786 658 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 LAP3P28838 519 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 MMP15P51511 669 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PPP1CBP62140 327 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ERVK-25P63136 954 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 MVKQ03426 396 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PRKCDQ05655 676 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 FMODQ06828 376 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 SCRN3Q0VDG4 424 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TSTQ16762 297 aaKnown RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 DCAF12L2Q5VW00 463 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 C1QL2Q7Z5L3 287 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 CYP4Z1Q86W10 505 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ZNF101Q8IZC7 436 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 SEMA6DQ8NFY4 1073 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 RP9Q8TA86 221 aaKnown RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 NANPQ8TBE9 248 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 SLC25A40Q8TBP6 338 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ST7LQ8TDW4 575 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 IPCEF1Q8WWN9 437 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ACOT11Q8WXI4 607 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TSPAN32Q96QS1 320 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 GAL3ST1Q99999 423 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 HOPXQ9BPY8 73 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 G6PC2Q9NQR9 355 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 MAN2C1Q9NTJ4 1040 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TBCCD1Q9NVR7 557 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 GRHPRQ9UBQ7 328 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PCDHB10Q9UN67 800 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TANC2Q9HCD6 1990 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 TENM1Q9UKZ4 2725 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 LOC100509620A0A075B734 347 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 LOC100653049A0A140TA62 436 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 IFNL4K9M1U5 179 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 WNT9BO14905 357 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 SPRY3O43610 288 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 PLPP2O43688 288 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 DEAF1O75398 565 aaPredicted RBP10.13□□□□□ -0.79
UPF3B-204ENST00000619445 FOXH1O75593 365 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 KRT34O76011 436 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 ABHD16AO95870 558 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 IGHV1-46P01743 117 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 EPHA1P21709 976 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 WNT5AP41221 380 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 HILS1P60008 231 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 SRSF2Q01130 221 aaKnown RBP10.13□□□□□ -0.79
UPF3B-204ENST00000619445 MTX3Q5HYI7 312 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 ZNF730Q6ZMV8 503 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 NRMQ8IXM6 262 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 AKR7LQ8NHP1 331 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 ABHD4Q8TB40 342 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 FAM216AQ8WUB2 273 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 CCL17Q92583 94 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 C4orf45Q96LM5 186 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 OR2J1Q9GZK6 312 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 WNT5BQ9H1J7 359 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 KRCC1Q9NPI7 259 aaPredicted RBP10.13□□□□□ -0.79
UPF3B-204ENST00000619445 FGFR1OP2Q9NVK5 253 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 ATPIF1Q9UII2 106 aa10.13□□□□□ -0.79
UPF3B-204ENST00000619445 A0A1W2PPL8 197 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 GSTA4O15217 222 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 TIMM8AO60220 97 aaPredicted RBP10.12□□□□□ -0.79
UPF3B-204ENST00000619445 UBOX5O94941 541 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 VENTXO95231 258 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 CD14P08571 375 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 FPR2P25090 351 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 RPL4P36578 427 aaKnown RBP10.12□□□□□ -0.79
UPF3B-204ENST00000619445 COMPP49747 757 aaPredicted RBP10.12□□□□□ -0.79
UPF3B-204ENST00000619445 ACTG1P63261 375 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 GLO1Q04760 184 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 ZBED5Q49AG3 693 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 IFI44LQ53G44 452 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 SPATA46Q5T0L3 261 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 AVPI1Q5T686 147 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 GPR139Q6DWJ6 353 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 PGM2L1Q6PCE3 622 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 RFPL4BQ6ZWI9 263 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 TMPRSS11FQ6ZWK6 438 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 MBOAT2Q6ZWT7 520 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 FKBP9P1Q75LS8 142 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 SPICQ8N5J4 248 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 LRRC75AQ8NAA5 344 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 OR51A7Q8NH64 312 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 NTN4Q9HB63 628 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 POLE4Q9NR33 117 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 KLHL21Q9UJP4 597 aa10.12□□□□□ -0.79
UPF3B-204ENST00000619445 TRAV27A0A087WT01 109 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 IGKV1D-43A0A0B4J1Z2 117 aa10.11□□□□□ -0.79
UPF3B-204ENST00000619445 ISPDA4D126 451 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms