RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 SLC34A2O95436 690 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 HOXC4P09017 264 aaPredicted RBP9.79□□□□□ -0.84
UPF3A-212ENST00000619079 ZNF735P0CB33 412 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 SELLP14151 372 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 NQO2P16083 231 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 MPZP25189 248 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 LAP3P28838 519 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 AVPR2P30518 371 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 AQP2P41181 271 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 ADAM8P78325 824 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 DUSP5Q16690 384 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 DPY19L2P2Q6ZN68 376 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 LRRC25Q8N386 305 aaPredicted RBP9.79□□□□□ -0.84
UPF3A-212ENST00000619079 RNF166Q96A37 237 aaPredicted RBP9.79□□□□□ -0.84
UPF3A-212ENST00000619079 GPR174Q9BXC1 333 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 NMNAT2Q9BZQ4 307 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 AICDAQ9GZX7 198 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 LAT2Q9GZY6 243 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 CYTL1Q9NRR1 136 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 DEC1Q9P2X7 70 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 CACFD1Q9UGQ2 172 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 SHPKQ9UHJ6 478 aa9.79□□□□□ -0.84
UPF3A-212ENST00000619079 CENPVL1A0A0U1RR11 272 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 A0A1W2PPE3 182 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 A0A1W2PS29 197 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 HSPB2A8KAH6 182 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 M0QYG6 137 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 ARPC3O15145 178 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 SMAD9O15198 467 aaKnown RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 UPK3AO75631 287 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 IFNA17P01571 189 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 CTHP32929 405 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 P2RY4P51582 365 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 PRDX1Q06830 199 aaKnown RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 RASGEF1BQ0VAM2 473 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 FHL1Q13642 323 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 MLF2Q15773 248 aaPredicted RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 HSPB2Q16082 182 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 SCGB2B2Q4G0G5 96 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 SLC16A9Q7RTY1 509 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 AMZ2Q86W34 360 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 ZNF676Q8N7Q3 588 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 NPEPL1Q8NDH3 523 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 OR7G2Q8NG99 324 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 RNASE11Q8TAA1 199 aaKnown RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 GRHL3Q8TE85 626 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 CPNE4Q96A23 557 aaPredicted RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 NUS1Q96E22 293 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 KIRREL1Q96J84 757 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 Q96M85 177 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 WDR77Q9BQA1 342 aaPredicted RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 SYT4Q9H2B2 425 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 C8orf33Q9H7E9 229 aaPredicted RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 SLC27A6Q9Y2P4 619 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 ENTPD2Q9Y5L3 495 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 CPED1A4D0V7 1026 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 C5orf51A6NDU8 294 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 PPIHO43447 177 aaKnown RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 DUS4LO95620 317 aaKnown RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 KLK3P07288 261 aaPredicted RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 OR8G3PP0DMU2 310 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 RPL4P36578 427 aaKnown RBP9.78□□□□□ -0.84
UPF3A-212ENST00000619079 HGFACQ04756 655 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 C2orf76Q3KRA6 126 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 C9orf152Q5JTZ5 239 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 DCST2Q5T1A1 773 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 ZNF585AQ6P3V2 769 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 SSX9Q7RTT3 188 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 C1QL4Q86Z23 238 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 FAM3CQ92520 227 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 MCHR2Q969V1 340 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 FBXO17Q96EF6 278 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 WNT16Q9UBV4 365 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 ADAM18Q9Y3Q7 739 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 TTC28Q96AY4 2481 aa9.78□□□□□ -0.84
UPF3A-212ENST00000619079 EEF1E1-BLOC1S5C9J1V9 151 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 PSMD9O00233 223 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 OIP5O43482 229 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 FCGR3AP08637 254 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 S100A2P29034 98 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 ZXDAP98168 799 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 KRBOX4Q5JUW0 171 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 PAPD4Q6PIY7 484 aaKnown RBP9.77□□□□□ -0.84
UPF3A-212ENST00000619079 DHRS11Q6UWP2 260 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 ZNF584Q8IVC4 421 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 SHDQ96IW2 340 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 NMNAT3Q96T66 252 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 MENTQ9BUN1 341 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 ALG12Q9BV10 488 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 TRIM2Q9C040 744 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 CST11Q9H112 138 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 PARP11Q9NR21 331 aa9.77□□□□□ -0.84
UPF3A-212ENST00000619079 KIAA1549LQ6ZVL6 1849 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 A0A1B0GVT2 93 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 A0A1B0GWA3 101 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 POM121BA6NF01 834 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms