RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ELOA3BQ3SY89 546 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 HSD17B12Q53GQ0 312 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF787Q6DD87 383 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SLC27A4Q6P1M0 643 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ULK3Q6PHR2 472 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CD200R1LQ6Q8B3 271 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF474Q6S9Z5 364 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CCBE1Q6UXH8 406 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PAMR1Q6UXH9 720 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 RASSF6Q6ZTQ3 369 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FCRLAQ7L513 359 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 NANOGNBQ7Z5D8 188 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ABHD12BQ7Z5M8 362 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 RANBP3LQ86VV4 465 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TPRA1Q86W33 373 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF295-AS1Q8N0V1 137 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 KDM8Q8N371 416 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 LRRC17Q8N6Y2 441 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 DUSP18Q8NEJ0 188 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 IL17RDQ8NFM7 739 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ELOA3Q8NG57 546 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 OR6S1Q8NH40 331 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PIGXQ8TBF5 258 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 HAVCR2Q8TDQ0 301 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 HSD17B8Q92506 261 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PHYHIPQ92561 330 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SGCDQ92629 289 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 RPL3LQ92901 407 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 GTPBP3Q969Y2 492 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SLC25A46Q96AG3 418 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 MRPL48Q96GC5 212 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZC3HAV1LQ96H79 300 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PRRC1Q96M27 445 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CMTM3Q96MX0 182 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF385AQ96PM9 386 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 GPA33Q99795 319 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FOXC2Q99958 501 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CHCHD6Q9BRQ6 235 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM43Q9BTV4 400 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 MRI1Q9BV20 369 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 RBM24Q9BX46 236 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 GON7Q9BXV9 100 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 NDEL1Q9GZM8 345 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 OPN3Q9H1Y3 402 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 KCNN2Q9H2S1 579 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FN3KQ9H479 309 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ABCB10Q9NRK6 738 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 C20orf141Q9NUB4 165 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 KLHL13Q9P2N7 655 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 B3GAT1Q9P2W7 334 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 RPS6KB2Q9UBS0 482 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 REV1Q9UBZ9 1251 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 KLHL21Q9UJP4 597 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF221Q9UK13 617 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PROCRQ9UNN8 238 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 BAIAP2Q9UQB8 552 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TRAV36DV7A0A075B6V5 113 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 LOC100506127A0A0U1RQW1 187 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 LOC102725191A0A1B0GVB3 256 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CCDC182A6NF36 153 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 FABP12A6NFH5 140 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 AQP7P3A6NL99 342 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 EEF1E1-BLOC1S5C9J1V9 151 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 H3BN98 237 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 BOLA2-SMG1P6H3BVE0 249 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ARHGEF9O43307 516 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 EEF1E1O43324 174 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TBX1O43435 398 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 AKAP8O43823 692 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ENTPD6O75354 484 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CCNKO75909 580 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TPPPO94811 219 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 AHSA1O95433 338 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CH25HO95992 272 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PTHP01270 115 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 IGF2P01344 180 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 HLA-DQB1P01920 261 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CD1AP06126 327 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TSPAN19P0C672 248 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 HSMCR30P0CW71 290 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 HLA-DOBP13765 273 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 HOXB1P14653 301 aaPredicted RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 POU2F1P14859 743 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 MAKP20794 623 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 NR4A1P22736 598 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ERP29P30040 261 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 AGTR1P30556 359 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 GABRA5P31644 462 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 UQCRC1P31930 480 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CCKARP32238 428 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 MTNR1AP48039 350 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TAS2R41P59536 307 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TAS2R43P59537 309 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 LSM3P62310 102 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SLC35A1P78382 337 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 LGALS3BPQ08380 585 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SNTB1Q13884 538 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SLC17A1Q14916 467 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ETFDHQ16134 617 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms