RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 CAPZA2P47755 286 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 BLVRAP53004 296 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 TEKQ02763 1124 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 APOFQ13790 326 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 SLC25A30Q5SVS4 291 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF691Q5VV52 312 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 OTPQ5XKR4 325 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 MDP1Q86V88 176 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 WFDC8Q8IUA0 241 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 GID4Q8IVV7 300 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 OR6K6Q8NGW6 343 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 TFAP2CQ92754 450 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 FBXO17Q96EF6 278 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF75AQ96N20 296 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 WACQ9BTA9 647 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 MARCH7Q9H992 704 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 KCNN3Q9UGI6 736 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 TVP23AA6NH52 213 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 C12orf71A8MTZ7 269 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 CLIC3O95833 236 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 IGKV3-15P01624 115 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 IGLV1-44P01699 117 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 HLA-DQA2P01906 255 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 PATE4P0C8F1 98 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 CD79AP11912 226 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 COX6B1P14854 86 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 CBR1P16152 277 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 GSG1Q2KHT4 349 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 C3orf36Q3SXR2 165 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 SLC36A2Q495M3 483 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 KLHL12Q53G59 568 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 IZUMO2Q6UXV1 221 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 SYT9Q86SS6 491 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF511Q8NB15 262 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 RHOXF1Q8NHV9 184 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF582Q96NG8 517 aaPredicted RBP17.17■□□□□ 0.34
UPF3A-211ENST00000618700 APOL4Q9BPW4 351 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 KCNG2Q9UJ96 466 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 PKDREJQ9NTG1 2253 aa17.17■□□□□ 0.34
UPF3A-211ENST00000618700 SIAH2O43255 324 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 MPZL2O60487 215 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 PSKH1P11801 424 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF32P17041 273 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 COL8A1P27658 744 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 MMP16P51512 607 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 PCBD1P61457 104 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 RAB1AP62820 205 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 PIGFQ07326 219 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 IL18R1Q13478 541 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 AQP6Q13520 282 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 DAZAP2Q15038 168 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-211ENST00000618700 OCLNQ16625 522 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 PCK2Q16822 640 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 USP51Q70EK9 711 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 MEPCEQ7L2J0 689 aaKnown RBP17.16■□□□□ 0.34
UPF3A-211ENST00000618700 TIGD4Q8IY51 512 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 ZMYND19Q96E35 227 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-211ENST00000618700 TEAD3Q99594 435 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 RASSF4Q9H2L5 321 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 KCNN2Q9H2S1 579 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 WDR76Q9H967 626 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 CCNB1IP1Q9NPC3 277 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 DNAJC27Q9NZQ0 273 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 ASH2LQ9UBL3 628 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 LHFPL6Q9Y693 200 aa17.16■□□□□ 0.34
UPF3A-211ENST00000618700 SLC22A31A6NKX4 558 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 DEFB108AA8MXU0 73 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 CASKO14936 926 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 GNAO1P09471 354 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF14P17017 642 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-211ENST00000618700 GSTT1P30711 240 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 ARR3P36575 388 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 ENTPD1P49961 510 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF83P51522 516 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 CDH11P55287 796 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 RPS7P62081 194 aaKnown RBP17.15■□□□□ 0.34
UPF3A-211ENST00000618700 GGTLC2Q14390 218 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 BEX5Q5H9J7 111 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 TEX30Q5JUR7 227 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 C6orf52Q5T4I8 152 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 ALKBH2Q6NS38 261 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 TMEM53Q6P2H8 277 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 B3GLCTQ6Y288 498 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.15■□□□□ 0.34
UPF3A-211ENST00000618700 OR10H5Q8NGA6 315 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 C1QTNF6Q9BXI9 259 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 WNT5BQ9H1J7 359 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 NGBQ9NPG2 151 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 RASSF1Q9NS23 344 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 CYB5R1Q9UHQ9 305 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 POLR1DQ9Y2S0 133 aa17.15■□□□□ 0.34
UPF3A-211ENST00000618700 IGHV1-18A0A0C4DH31 117 aa17.14■□□□□ 0.33
UPF3A-211ENST00000618700 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-211ENST00000618700 GOSR1O95249 250 aa17.14■□□□□ 0.33
UPF3A-211ENST00000618700 RAB36O95755 333 aa17.14■□□□□ 0.33
UPF3A-211ENST00000618700 LOXP28300 417 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-211ENST00000618700 HTR1FP30939 366 aa17.14■□□□□ 0.33
UPF3A-211ENST00000618700 HSPA13P48723 471 aa17.14■□□□□ 0.33
UPF3A-211ENST00000618700 HIST1H3AP68431 136 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms