RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-228ENST00000618469 SAMD8Q96LT4 415 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 RHNO1Q9BSD3 238 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 ZNF416Q9BWM5 594 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 REG4Q9BYZ8 158 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 OR2H1Q9GZK4 316 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 LRMDAQ9H2I8 198 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 VSX1Q9NZR4 365 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-228ENST00000618469 CDH10Q9Y6N8 788 aa13.76□□□□□ -0.21
BRCA1-228ENST00000618469 KHDRBS3O75525 346 aaKnown RBP13.75□□□□□ -0.21
BRCA1-228ENST00000618469 TXNDC12O95881 172 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 SCG5P05408 212 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 CSF3P09919 207 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 APEHP13798 732 aaKnown RBP13.75□□□□□ -0.21
BRCA1-228ENST00000618469 STOMP27105 288 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 HMGA2P52926 109 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 PCBD1P61457 104 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 PSG4Q00888 419 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 TRAP1Q12931 704 aaKnown RBP13.75□□□□□ -0.21
BRCA1-228ENST00000618469 FLOT2Q14254 428 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 OTPQ5XKR4 325 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 OR2T5Q6IEZ7 315 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 RGS7BPQ6MZT1 257 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-228ENST00000618469 LEG1Q6P5S2 330 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 UGT2A3Q6UWM9 527 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 LINC00471Q8N535 108 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 AQP11Q8NBQ7 271 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 OR52L1Q8NGH7 329 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 OR2T29Q8NH02 315 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 FAM168AQ92567 244 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 DOK1Q99704 481 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 NUAK2Q9H093 628 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 WNT5BQ9H1J7 359 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 EGLN3Q9H6Z9 239 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 YAE1D1Q9NRH1 226 aa13.75□□□□□ -0.21
BRCA1-228ENST00000618469 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-228ENST00000618469 A0A1W2PPW3 197 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 TMEM129A0AVI4 362 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 DHRS12A0PJE2 317 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 AQP12BA6NM10 295 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 C12orf71A8MTZ7 269 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 M0R233 179 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 DNAJC8O75937 253 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 F12P00748 615 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 LCKP06239 509 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 ERCC1P07992 297 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 NOS3P29474 1203 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 CDKN2AP42771 156 aaKnown RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 GDI2P50395 445 aaKnown RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 DSCR9P59020 149 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 ERVS71-1P61550 626 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 CARTPTQ16568 116 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 ZNF770Q6IQ21 691 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 RPL13AP3Q6NVV1 102 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 ZNF774Q6NX45 483 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 DNM1P34Q6PK57 102 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 LRP11Q86VZ4 500 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 AQP12AQ8IXF9 295 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 ZCCHC24Q8N2G6 241 aaKnown RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 OR4K13Q8NH42 304 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 NMNAT3Q96T66 252 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 RAB1BQ9H0U4 201 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 TPK1Q9H3S4 243 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 MYEF2Q9P2K5 600 aaKnown RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 COA3Q9Y2R0 106 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-228ENST00000618469 POLR1DQ9Y2S0 133 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 TIMM10BQ9Y5J6 103 aa13.74□□□□□ -0.21
BRCA1-228ENST00000618469 LOC100509620A0A075B734 347 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 C5orf49A4QMS7 147 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 ARPC3O15145 178 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 SYNGR3O43761 229 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 DOK2O60496 412 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 RENP00797 406 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 ADRA2AP08913 450 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
BRCA1-228ENST00000618469 CENPAP49450 140 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 SCRN3Q0VDG4 424 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 MAD2L1BPQ15013 274 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-228ENST00000618469 PGM2L1Q6PCE3 622 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-228ENST00000618469 SPATA24Q86W54 205 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 GLB1L2Q8IW92 636 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 OR10H5Q8NGA6 315 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 C10orf105Q8TEF2 133 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 CANT1Q8WVQ1 401 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 TMEM158Q8WZ71 300 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 TSSK2Q96PF2 358 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 CHID1Q9BWS9 393 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 PLA2G12AQ9BZM1 189 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 BCL2L14Q9BZR8 327 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 FN3KQ9H479 309 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 TBC1D23Q9NUY8 699 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 DUSP13Q9UII6 198 aa13.73□□□□□ -0.21
BRCA1-228ENST00000618469 DCTN6O00399 190 aa13.72□□□□□ -0.21
BRCA1-228ENST00000618469 MPZL1O95297 269 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms