RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 GPR12P47775 334 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 ELAVL1Q15717 326 aaKnown RBP17.1■□□□□ 0.33
GABPB1-212ENST00000615671 SPRED3Q2MJR0 410 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 PLPPR2Q96GM1 343 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 CENPOQ9BU64 300 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 FITM1A5D6W6 292 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 K7EQM0 130 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 T-ENOLP0DO92 83 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 APOBEC1P41238 236 aaKnown RBP17.1■□□□□ 0.33
GABPB1-212ENST00000615671 RPS23P62266 143 aaKnown RBP17.1■□□□□ 0.33
GABPB1-212ENST00000615671 NXNL2Q5VZ03 156 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 BAGE3Q86Y29 109 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 BAGE2Q86Y30 109 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 KIRREL1Q96J84 757 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 CHST6Q9GZX3 395 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 SLCO2B1O94956 709 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 OR5G3P0C626 314 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 LSAMPQ13449 338 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 GPR119Q8TDV5 335 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 CLEC2LP0C7M8 214 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 SRMP19623 302 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 DLX5P56178 289 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 TVP23CQ96ET8 276 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 ADAM19Q9H013 955 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 KCNG2Q9UJ96 466 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 LOC100289279A0A1B0GTE1 492 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 SH2D1BO14796 132 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 INSM1Q01101 510 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-212ENST00000615671 STEAP1BQ6NZ63 245 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 OR10AD1Q8NGE0 317 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 OR5M11Q96RB7 305 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 ZNF71Q9NQZ8 489 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-212ENST00000615671 ASH2LQ9UBL3 628 aa17.1■□□□□ 0.33
GABPB1-212ENST00000615671 SHISA8B8ZZ34 492 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 SOCS7O14512 581 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 SRFP11831 508 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 ENTHD1Q8IYW4 607 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 FSCN3Q9NQT6 498 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 CRYAAP02489 173 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 OR13C7P0DN81 318 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 MS4A6EQ96DS6 147 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 NEURL3Q96EH8 262 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 FN3KRPQ9HA64 309 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 ZNF346Q9UL40 294 aaKnown RBP17.09■□□□□ 0.33
GABPB1-212ENST00000615671 GPR37O15354 613 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 FGF17O60258 216 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 CD14P08571 375 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 IAH1Q2TAA2 248 aaPredicted RBP17.09■□□□□ 0.33
GABPB1-212ENST00000615671 LPCAT3Q6P1A2 487 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 KCNE4Q8WWG9 221 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 FBXW5Q969U6 566 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 CLEC1BQ9P126 229 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 HTR1FP30939 366 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 LSMEM2Q8N112 164 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 CHTF18Q8WVB6 975 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 MRPS24Q96EL2 167 aaKnown RBP17.09■□□□□ 0.33
GABPB1-212ENST00000615671 EXO1Q9UQ84 846 aaKnown RBP17.09■□□□□ 0.33
GABPB1-212ENST00000615671 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 MAGEB4O15481 346 aaPredicted RBP17.09■□□□□ 0.33
GABPB1-212ENST00000615671 GLCEO94923 617 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 CPEP16870 476 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 ADGRE4PQ86SQ3 457 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 NANPQ8TBE9 248 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 SLC22A11Q9NSA0 550 aa17.09■□□□□ 0.33
GABPB1-212ENST00000615671 PCYT1BQ9Y5K3 369 aaPredicted RBP17.09■□□□□ 0.33
GABPB1-212ENST00000615671 PAPLNO95428 1278 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 RPS27P42677 84 aaKnown RBP17.08■□□□□ 0.33
GABPB1-212ENST00000615671 ZNF767PQ75MW2 155 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 CORINQ9Y5Q5 1042 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 SLC22A20A6NK97 555 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 TXNDC12O95881 172 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 ZNF385BQ569K4 471 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 SIAH3Q8IW03 269 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 ST8SIA4Q92187 359 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 SLC35E1Q96K37 410 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 MED29Q9NX70 200 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 SLCO1B1Q9Y6L6 691 aa17.08■□□□□ 0.33
GABPB1-212ENST00000615671 OR10G3Q8NGC4 313 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 Q6ZRG5 221 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 CEPT1Q9Y6K0 416 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 SNAPINO95295 136 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 IAPPP10997 89 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 TEAD1P28347 426 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 EMDP50402 254 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 UBE2G1P62253 170 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 HLA-BQ31612 363 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 TMEM182Q6ZP80 229 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-212ENST00000615671 CISD2Q8N5K1 135 aaKnown RBP17.08■□□□□ 0.32
GABPB1-212ENST00000615671 TEX37Q96LM6 180 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 URGCP-MRPS24S4R325 110 aa17.08■□□□□ 0.32
GABPB1-212ENST00000615671 FIGNL2A6NMB9 653 aa17.07■□□□□ 0.32
GABPB1-212ENST00000615671 ZGLP1P0C6A0 271 aa17.07■□□□□ 0.32
GABPB1-212ENST00000615671 MKRN2Q9H000 416 aaKnown RBP17.07■□□□□ 0.32
GABPB1-212ENST00000615671 PLEKHF2Q9H8W4 249 aa17.07■□□□□ 0.32
GABPB1-212ENST00000615671 ZNF133P52736 654 aaPredicted RBP17.07■□□□□ 0.32
GABPB1-212ENST00000615671 PCBP3P57721 371 aaKnown RBP17.07■□□□□ 0.32
GABPB1-212ENST00000615671 DHRS13Q6UX07 377 aa17.07■□□□□ 0.32
GABPB1-212ENST00000615671 NECAP1Q8NC96 275 aa17.07■□□□□ 0.32
GABPB1-212ENST00000615671 SLC30A7Q8NEW0 376 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms