RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 THAP6Q8TBB0 222 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 NXF5Q9H1B4 397 aaKnown RBP9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 NOP16Q9Y3C1 178 aaKnown RBP9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RP1P56715 2156 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TVP23AA6NH52 213 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RHPN2P1A8MT19 583 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 F5H5P2 479 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 AKR7A3O95154 331 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CDKN2AP42771 156 aaKnown RBP9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OLFML2AQ68BL7 652 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZNF511Q8NB15 262 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PXT1Q8NFP0 134 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZNRF4Q8WWF5 429 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MRPS24Q96EL2 167 aaKnown RBP9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SPSB2Q99619 263 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 VSX1Q9NZR4 365 aaPredicted RBP9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 EMC3Q9P0I2 261 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 KLHL9Q9P2J3 617 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 FAM96BQ9Y3D0 163 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 EXPH5Q8NEV8 1989 aa9.79□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TRAV36DV7A0A075B6V5 113 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR2AT4A6NND4 320 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 DUX1O43812 170 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 UPK3AO75631 287 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CALCBP10092 127 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ART1P52961 327 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 GMFBP60983 142 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PAN3Q58A45 887 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ALG10Q5BKT4 473 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 UBE2NLQ5JXB2 153 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 GLT8D1Q68CQ7 371 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RBMS3Q6XE24 437 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CD163Q86VB7 1156 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 C9orf40Q8IXQ3 194 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MUC20Q8N307 709 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 FAM160A2Q8N612 972 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR10Z1Q8NGY1 313 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR1L3Q8NH93 324 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SCARB1Q8WTV0 552 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZNF501Q96CX3 271 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 HSPA12BQ96MM6 686 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 NMNAT3Q96T66 252 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ALG12Q9BV10 488 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TCF7L1Q9HCS4 588 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PIPOXQ9P0Z9 390 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PRELID3BQ9Y3B1 194 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 A0A1B0GX78 115 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 DNASE2O00115 360 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR8G3PP0DMU2 310 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 VSIG10L2P0DP72 767 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SUMO3P55854 103 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZP4Q12836 540 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SRSF5Q13243 272 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 CBFBQ13951 182 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TMPRSS9Q7Z410 1059 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 BEST3Q8N1M1 668 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR1S1Q8NH92 325 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 C15orf40Q8WUR7 153 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 S100A16Q96FQ6 103 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 DPYSL5Q9BPU6 564 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 NUDT9Q9BW91 350 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TINAGL1Q9GZM7 467 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 WWTR1Q9GZV5 400 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 LDAHQ9H6V9 325 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 IFT22Q9H7X7 185 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RXFP3Q9NSD7 469 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 FAM86C1Q9NVL1 165 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TMEM14AQ9Y6G1 99 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OIP5O43482 229 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 S100A6P06703 90 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MAPK3P27361 379 aaPredicted RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 PGDP52209 483 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 EFNA3P52797 238 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SNRPEP62304 92 aaKnown RBP9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RABEPKQ7Z6M1 372 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR10R2Q8NGX6 335 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 LPAR4Q99677 370 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SOHLH2Q9NX45 425 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ANKRD10Q9NXR5 420 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ETV7Q9Y603 341 aa9.78□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MED12Q93074 2177 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 TRBV5-7A0A0A0MS05 114 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 BLOC1S5-TXNDC5H3BN57 136 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 AIPO00170 330 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SULT1C2O00338 296 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ANXA2P07355 339 aaKnown RBP9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 GABRA1P14867 456 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SRMP19623 302 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 MRPS10P82664 201 aaKnown RBP9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZNF117Q03924 483 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SGCBQ16585 318 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 OR10K2Q6IF99 312 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 ZNF519Q8TB69 540 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 RLN3Q8WXF3 142 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 NSMAFQ92636 917 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 C20orf24Q9BUV8 137 aa9.77□□□□□ -0.84
SENP3-EIF4A1-201ENST00000614237 SRPK3Q9UPE1 567 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms