RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CDC20BQ86Y33 519 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ERI1Q8IV48 349 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 GPR137CQ8N3F9 429 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 OR10H4Q8NGA5 316 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 OR52N1Q8NH53 320 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 MUL1Q969V5 352 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 APH1AQ96BI3 265 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 MYCBPQ99417 103 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 MND1Q9BWT6 205 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 RERGLQ9H628 205 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 WDR76Q9H967 626 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 MRPL22Q9NWU5 206 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 CHCHD3Q9NX63 227 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ERVK13-1Q9NX77 482 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 CLEC4AQ9UMR7 237 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ERGIC3Q9Y282 383 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 LSM2Q9Y333 95 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 EMC9Q9Y3B6 208 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ANKHD1Q8IWZ3 2542 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 HCFC1P51610 2035 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ACANP16112 2415 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 TVP23AA6NH52 213 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 PHYHO14832 338 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 MYL12BO14950 172 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 SLC19A2O60779 497 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 PTHP01270 115 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 SSTR2P30874 369 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 MAP2K4P45985 399 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 CAPZA2P47755 286 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 OR3A2P47893 321 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 ENTPD1P49961 510 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 ETV1P50549 477 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 MRPS34P82930 218 aaKnown RBP10.06□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF85Q03923 595 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 GALEQ14376 348 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 NRN1LQ496H8 165 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 TSPO2Q5TGU0 170 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 SEM1Q6ZVN7 128 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 FAM214BQ7L5A3 538 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 NUFIP2Q7Z417 695 aaKnown RBP10.06□□□□□ -0.8
SLIRP-212ENST00000613856 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 NANOGP1Q8N7R0 232 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 OR6K3Q8NGY3 331 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 OR6N2Q8NGY6 317 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 OTOSQ8NHW6 89 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 NSMAFQ92636 917 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 MRPL48Q96GC5 212 aaKnown RBP10.06□□□□□ -0.8
SLIRP-212ENST00000613856 ALKBH3Q96Q83 286 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-212ENST00000613856 GPR35Q9HC97 309 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 POLE4Q9NR33 117 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 TAS2R16Q9NYV7 291 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 MALT1Q9UDY8 824 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 TMEM14AQ9Y6G1 99 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 FBN3Q75N90 2809 aa10.06□□□□□ -0.8
SLIRP-212ENST00000613856 A0A1W2PPL8 197 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 A0A1W2PQL4 384 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 DAPL1A0PJW8 107 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF587BE7ETH6 402 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF670-ZNF695F2Z2N8 137 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 CNOT4O95628 575 aaKnown RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 GPANK1O95872 356 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 HLA-DQA2P01906 255 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 NPR2P20594 1047 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 MSR1P21757 451 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 EDNRAP25101 427 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 WNT4P56705 351 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 LSM6P62312 80 aaKnown RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ACTA2P62736 377 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ACTG2P63267 376 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ADAM8P78325 824 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 NEDD8Q15843 81 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 CDONQ4KMG0 1287 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 SYT6Q5T7P8 510 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 TFAP2EQ6VUC0 442 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF627Q7L945 461 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 LINGO2Q7L985 606 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ABHD12BQ7Z5M8 362 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 DOLPP1Q86YN1 238 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF100Q8IYN0 542 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 SYS1Q8N2H4 156 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 KLHL36Q8N4N3 616 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF485Q8NCK3 441 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 OR10H5Q8NGA6 315 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 C11orf40Q8WZ69 217 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 RORBQ92753 470 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 NABP1Q96AH0 204 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 ALG8Q9BVK2 526 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 NELFAQ9H3P2 528 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 GSX1Q9H4S2 264 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 CRLF2Q9HC73 371 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 BATF3Q9NR55 127 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 SLC7A10Q9NS82 523 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 CLEC2DQ9UHP7 191 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 COPS3Q9UNS2 423 aa10.05□□□□□ -0.8
SLIRP-212ENST00000613856 CAB39Q9Y376 341 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-212ENST00000613856 HSPB2A8KAH6 182 aa10.04□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF99A8MXY4 864 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms