RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 LHX3Q9UBR4 397 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF860A6NHJ4 632 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 F6UZH7 168 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 OLFM2O95897 454 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PRSS56P0CW18 603 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 OR8G3PP0DMU2 310 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 EPXP11678 715 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 GABRA1P14867 456 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ETFDHQ16134 617 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 HAGHQ16775 308 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CTSL3PQ5NE16 218 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TRILQ7L0X0 811 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 LRRTM3Q86VH5 581 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 FAM160A2Q8N612 972 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ACOT4Q8N9L9 421 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CLEC1AQ8NC01 280 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 BOCQ9BWV1 1114 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ESRP2Q9H6T0 727 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 UQCC1Q9NVA1 299 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 LAMP3Q9UQV4 416 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 BAZ2AQ9UIF9 1905 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TMEM269A0A1B0GVZ9 245 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 GPR31O00270 319 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ARSAP15289 507 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF90Q03938 601 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SYPL1Q16563 259 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SYT13Q7L8C5 426 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF429Q86V71 674 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TMEM229BQ8NBD8 167 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 NLGN4YQ8NFZ3 816 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 OR9A2Q8NGT5 310 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TMEM40Q8WWA1 233 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TEX37Q96LM6 180 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 METTL9Q9H1A3 318 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 FRS3O43559 492 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SUSD5O60279 629 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 GPR75O95800 540 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PMP2P02689 132 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 RGPD2P0DJD1 1756 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CPMP14384 443 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 MMP11P24347 488 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CSNK1A1P48729 337 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF133P52736 654 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 HSF1Q00613 529 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PRSS36Q5K4E3 855 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SFRP5Q5T4F7 317 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PRAMEF9Q5VWM5 478 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 MRM1Q6IN84 353 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PARS2Q7L3T8 475 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 MRPL21Q7Z2W9 205 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 MEX3DQ86XN8 651 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 FAM24BQ8N5W8 94 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 RCBTB1Q8NDN9 531 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CA5BP1Q8WTZ4 195 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ALG12Q9BV10 488 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 NXF2Q9GZY0 626 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ZDHHC11Q9H8X9 412 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF160Q9HCG1 818 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 PRSS16Q9NQE7 514 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 NECAP2Q9NVZ3 263 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CTSFQ9UBX1 484 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CHST2Q9Y4C5 530 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 IFITM5A6NNB3 132 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 K7ERQ8 282 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 IGHG1P01857 330 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 GABRR1P24046 479 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ACKR3P25106 362 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SLC6A1P30531 599 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 VEGFBP49765 207 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SULT1A2P50226 295 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 IHHQ14623 411 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TESK1Q15569 626 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 SLC22A6Q4U2R8 563 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 IER5LQ5T953 404 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CARD17Q5XLA6 110 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF626Q68DY1 528 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 DPY19L2P2Q6ZN68 376 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 HSD11B1LQ7Z5J1 315 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 BCDIN3DQ7Z5W3 292 aaKnown RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 VRK2Q86Y07 508 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 DEFB119Q8N690 84 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 OR5AR1Q8NGP9 310 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 MS4A4AQ96JQ5 239 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 FAM71F1Q96KD3 344 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-211ENST00000613795 CDCP1Q9H5V8 836 aa6.31□□□□□ -1.4
CLCN3-211ENST00000613795 TCRBV5S1A1TA0A578 114 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 XKRY2A2RUG3 117 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 FAM227AF5H4B4 570 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 FXYD1O00168 92 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 LY86O95711 162 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 CD46P15529 392 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 HIST1H1TP22492 207 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-211ENST00000613795 CD38P28907 300 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 SLC35A1P78382 337 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 MEP1BQ16820 701 aa6.3□□□□□ -1.4
CLCN3-211ENST00000613795 TUSC1Q2TAM9 212 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms