RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 FAM185AQ8N0U4 392 aa18.41■□□□□ 0.54
CTDP1-208ENST00000613122 CISD2Q8N5K1 135 aaKnown RBP18.41■□□□□ 0.54
CTDP1-208ENST00000613122 ARIH2OSQ8N7S6 290 aa18.41■□□□□ 0.54
CTDP1-208ENST00000613122 TMEM102Q8N9M5 508 aaPredicted RBP18.41■□□□□ 0.54
CTDP1-208ENST00000613122 RPL3LQ92901 407 aaKnown RBP18.41■□□□□ 0.54
CTDP1-208ENST00000613122 PLEKHF2Q9H8W4 249 aa18.41■□□□□ 0.54
CTDP1-208ENST00000613122 TJP1Q07157 1748 aa18.41■□□□□ 0.54
CTDP1-208ENST00000613122 RAB13P51153 203 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 RPL11P62913 178 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 HTR4Q13639 388 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 OR2L13Q8N349 312 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 PRRC2BQ5JSZ5 2229 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 HSBP1L1C9JCN9 74 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 SULT1C2O00338 296 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 FZD6O60353 706 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 HTRA4P83105 476 aaPredicted RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 NHSL2Q5HYW2 709 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 RBMS3Q6XE24 437 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 PRRX2Q99811 253 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 CGGBP1Q9UFW8 167 aaPredicted RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 PRELID1Q9Y255 219 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 M0R135 149 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 RAB27BO00194 218 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 CLEC3BP05452 202 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 RPA2P15927 270 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 ANXA7P20073 488 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 PSMB1P20618 241 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 LAP3P28838 519 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 CYHR1Q6ZMK1 362 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 OVCH1Q7RTY7 1134 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 DEFB108BQ8NET1 73 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 ZNF799Q96GE5 643 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 OR5M11Q96RB7 305 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 RAP2BP61225 183 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 RPS27AP62979 156 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 UBA52P62987 128 aaKnown RBP18.4■□□□□ 0.54
CTDP1-208ENST00000613122 GUSBP11Q6P575 273 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 USP51Q70EK9 711 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 TTC9Q92623 222 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 QPCTLQ9NXS2 382 aa18.4■□□□□ 0.54
CTDP1-208ENST00000613122 LOC107986453A0A1B0GWG9 222 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 FBXO24O75426 580 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 FAM157BP0CG42 384 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 GLRA1P23415 457 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 ARL16Q0P5N6 197 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 KDM4DQ6B0I6 523 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 OR51F2Q8NH61 342 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 TCTEX1D2Q8WW35 142 aa18.39■□□□□ 0.54
CTDP1-208ENST00000613122 EXO1Q9UQ84 846 aaKnown RBP18.39■□□□□ 0.54
CTDP1-208ENST00000613122 PRKNO60260 465 aaPredicted RBP18.39■□□□□ 0.53
CTDP1-208ENST00000613122 CHRM2P08172 466 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 HNF4GQ14541 408 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 C19orf43Q9BQ61 176 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 TAF1P21675 1872 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 TRAV17A0A0B4J275 112 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 UPK1AO00322 258 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 HIST1H1CP16403 213 aaKnown RBP18.39■□□□□ 0.53
CTDP1-208ENST00000613122 RPL18Q07020 188 aaKnown RBP18.39■□□□□ 0.53
CTDP1-208ENST00000613122 OR1C1Q15619 314 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 ZNF74Q16587 644 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 LAX1Q8IWV1 398 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 OR2V1Q8NHB1 315 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 CD300AQ9UGN4 299 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 ABCD4O14678 606 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 ZIC2O95409 532 aaPredicted RBP18.39■□□□□ 0.53
CTDP1-208ENST00000613122 TATDN3Q17R31 274 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 KISS1RQ969F8 398 aaPredicted RBP18.39■□□□□ 0.53
CTDP1-208ENST00000613122 LRFN5Q96NI6 719 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 PSD2Q9BQI7 771 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 KIAA1456Q9P272 454 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 TRDV1A0A1B0GX56 115 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 XRCC2O43543 280 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 B4GALT3O60512 393 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 TGM6O95932 706 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 OR8U8P0C7N1 319 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 RAC1P63000 192 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 SYT14P1Q58G82 188 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 OR11G2Q8NGC1 345 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 OR10X1Q8NGY0 326 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 RHOXF1Q8NHV9 184 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 BANF2Q9H503 90 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 ACOXLQ9NUZ1 547 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 B3GALT5Q9Y2C3 310 aa18.39■□□□□ 0.53
CTDP1-208ENST00000613122 DDX60LQ5H9U9 1706 aaKnown RBP18.38■□□□□ 0.53
CTDP1-208ENST00000613122 CLN5O75503 358 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 GNB3P16520 340 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 CTGFP29279 349 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 ZNF718Q3SXZ3 478 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 CORO6Q6QEF8 472 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 NUDT8Q8WV74 236 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 SPACA9Q96E40 222 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-208ENST00000613122 TCEAL2Q9H3H9 227 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-208ENST00000613122 M0QYG6 137 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 NCCRP1Q6ZVX7 275 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-208ENST00000613122 RIMS4Q9H426 269 aaPredicted RBP18.38■□□□□ 0.53
CTDP1-208ENST00000613122 ZMAT3Q9HA38 289 aaKnown RBP18.38■□□□□ 0.53
CTDP1-208ENST00000613122 SBK2P0C263 348 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 SPI1P17947 270 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 LHFPL2Q6ZUX7 228 aa18.38■□□□□ 0.53
CTDP1-208ENST00000613122 CATSPERDQ86XM0 798 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms