RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MASP1P48740 699 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PTPRCAPQ14761 206 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 CSNK1A1LQ8N752 337 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF461Q8TAF7 563 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SFRP2Q96HF1 295 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SLC2A13Q96QE2 648 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 HEATR1Q9H583 2144 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 BCAS3Q9H6U6 928 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 IL20RAQ9UHF4 553 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 H2BFMP0C1H6 154 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TSPAN31Q12999 210 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SLC14A1Q13336 389 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MIDNQ504T8 468 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 NCBP2-AS2Q69YL0 99 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SLC27A1Q6PCB7 646 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TOP6BLQ8N6T0 577 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FAM3DQ96BQ1 224 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR5V1Q9UGF6 321 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 HES2Q9Y543 173 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FLVCR1Q9Y5Y0 555 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 THSD7AQ9UPZ6 1657 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZCWPW2A0A1B0GU75 182 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZAR1LA6NP61 321 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GLB1P16278 677 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SELENOPP49908 381 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 P2RX1P51575 399 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR2G6Q5TZ20 316 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR1S1Q8NH92 325 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 LMX1AQ8TE12 382 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 IL22RA2Q969J5 263 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TCTN2Q96GX1 697 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 C4orf36Q96KX1 117 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OARD1Q9Y530 152 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PRRT4C9JH25 899 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TTC32Q5I0X7 151 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FBLIM1Q8WUP2 373 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 BLNKQ8WV28 456 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 KLRG1Q96E93 195 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PLEKHB1Q9UF11 243 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SERPINE2P07093 398 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 KCNE1P15382 129 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PRPS1P60891 318 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 NRMQ8IXM6 262 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 DMRTA2Q96SC8 542 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 CASP7P55210 303 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 NCR3LG1Q68D85 454 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 DRAM2Q6UX65 266 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MEX3BQ6ZN04 569 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MON1AQ86VX9 555 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR11H7Q8NGC8 314 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 RPUSD4Q96CM3 377 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GPR174Q9BXC1 333 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF331Q9NQX6 463 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR6C3Q9NZP0 311 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ANKRD61A6NGH8 418 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MPC2O95563 127 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SHC1P29353 583 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MEP1BQ16820 701 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR8J2Q8NGG1 315 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 RNF19AQ9NV58 838 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 FBXO4Q9UKT5 387 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TBC1D3KA0A087X1G2 549 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CEBPZOSA8MTT3 80 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PRSS23O95084 383 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SLC10A3P09131 477 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 COX5BP10606 129 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 RPL12P30050 165 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MAXP61244 160 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF813Q6ZN06 617 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 RPS27LQ71UM5 84 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR5M1Q8NGP8 315 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 FOXJ1Q92949 421 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ANGPTL4Q9BY76 406 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ING1Q9UK53 422 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CDC42EP3Q9UKI2 254 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 WSB1Q9Y6I7 421 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 COL11A2P13942 1736 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 WDR90Q96KV7 1748 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CTDSPLO15194 276 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MGST1P10620 155 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PGGHGQ32M88 737 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR4N5Q8IXE1 308 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 LAS2Q8IYD9 372 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MAML2Q8IZL2 1156 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 LCN9Q8WX39 176 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 HIST1H2BAQ96A08 127 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 RNF2Q99496 336 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SLC17A9Q9BYT1 436 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 Q9N2K0 584 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TDP1Q9NUW8 608 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 DOK5Q9P104 306 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 GRHPRQ9UBQ7 328 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF107Q9UII5 783 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ARL2-SNX15V9GYD0 113 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ALPK2Q86TB3 2170 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 A0A0U1RQK1 487 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF891A8MT65 544 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 EDN1P05305 212 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PRLHRP49683 370 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms