RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 COX10Q12887 443 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 MELKQ14680 651 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 PCLAFQ15004 111 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 KLHL22Q53GT1 634 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 SPANXN4Q5MJ08 99 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 FAM201AQ5SY85 155 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 CEP85LQ5SZL2 805 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 ZBTB37Q5TC79 503 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 CD276Q5ZPR3 534 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 C11orf88Q6PI97 169 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 SPERTQ8NA61 448 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 ATG16L2Q8NAA4 619 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 MZB1Q8WU39 189 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 C10orf82Q8WW14 230 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 MCHR2Q969V1 340 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 C4orf45Q96LM5 186 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 PANX1Q96RD7 426 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 CENPHQ9H3R5 247 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 ELOVL3Q9HB03 270 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 SELENONQ9NZV5 590 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 IFT52Q9Y366 437 aa8.49□□□□□ -1.05
SSX3-204ENST00000612497 IGHV3-64DA0A0J9YX35 117 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 LRRC30A6NM36 301 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ABHD2P08910 425 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 FBP1P09467 338 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 PGA4P0DJD7 388 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 PGA3P0DJD8 388 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 GSTM3P21266 225 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 SLC6A2P23975 617 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 HTR2AP28223 471 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 S100A3P33764 101 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 CDKN2CP42773 168 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 CLRN1P58418 232 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 PSG4Q00888 419 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ULK3Q6PHR2 472 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ZNF841Q6ZN19 808 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 DCDC5Q6ZRR9 648 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 CNPY4Q8N129 248 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 LSMEM1Q8N8F7 131 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 PNLDC1Q8NA58 520 aaKnown RBP8.48□□□□□ -1.05
SSX3-204ENST00000612497 OR5J2Q8NH18 312 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 SLC38A5Q8WUX1 472 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 TESCQ96BS2 214 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 CCDC115Q96NT0 180 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ZNF347Q96SE7 839 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ZNF607Q96SK3 696 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 SIRPDQ9H106 197 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 SEMA6AQ9H2E6 1030 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ASIC5Q9NY37 505 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 ZNRD1Q9P1U0 126 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 BTNL2Q9UIR0 455 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 CAB39Q9Y376 341 aaPredicted RBP8.48□□□□□ -1.05
SSX3-204ENST00000612497 U3KQK5 164 aa8.48□□□□□ -1.05
SSX3-204ENST00000612497 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 A0A0G2JPF8 293 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 HNRNPCL2B2RXH8 293 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 HNRNPCL3B7ZW38 293 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 COPEO14579 308 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 RNF13O43567 381 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 HNRNPCL1O60812 293 aaKnown RBP8.47□□□□□ -1.05
SSX3-204ENST00000612497 FBXO24O75426 580 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 KRT75O95678 551 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 IGHG1P01857 330 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 HNRNPCL4P0DMR1 293 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 ETFAP13804 333 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 CDAP32320 146 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 MSX2P35548 267 aaPredicted RBP8.47□□□□□ -1.05
SSX3-204ENST00000612497 ETV4P43268 484 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 KIR2DS4P43632 304 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 NPY4RP50391 375 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 ARF6P62330 175 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 ERVK-25P63136 954 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 SGCAQ16586 387 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 ARL9Q6T311 187 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 MOGAT3Q86VF5 341 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 NUDCD3Q8IVD9 361 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 ALDH16A1Q8IZ83 802 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 C1orf87Q8N0U7 546 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 OR2T6Q8NHC8 308 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 SLC35B4Q969S0 331 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 CMBLQ96DG6 245 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 PPP1R36Q96LQ0 422 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 MMADHCQ9H3L0 296 aaPredicted RBP8.47□□□□□ -1.05
SSX3-204ENST00000612497 SIAEQ9HAT2 523 aa8.47□□□□□ -1.05
SSX3-204ENST00000612497 TMEM247A6NEH6 219 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 E9PBE3 544 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 E9PQ18 207 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 ICMTO60725 284 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 FSTL3O95633 263 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 ABHD16AO95870 558 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 MT-ATP6P00846 226 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 KITLGP21583 273 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 ALDH3A1P30838 453 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 SRP9P49458 86 aaKnown RBP8.46□□□□□ -1.06
SSX3-204ENST00000612497 CLNS1AP54105 237 aaKnown RBP8.46□□□□□ -1.06
SSX3-204ENST00000612497 KRTAP10-11P60412 298 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 DSTNP60981 165 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 DPY19L1Q2PZI1 675 aa8.46□□□□□ -1.06
SSX3-204ENST00000612497 FAM91A1Q658Y4 838 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms