RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.38
COL6A1-207ENST00000612273 PLCXD2Q0VAA5 305 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 FUT7Q11130 342 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 EEF1A1P5Q5VTE0 462 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-207ENST00000612273 TMEM225Q6GV28 225 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 EXD3Q8N9H8 876 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 FBXW5Q969U6 566 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 OR2A7Q96R45 310 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 NUDT9Q9BW91 350 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
COL6A1-207ENST00000612273 CKLFQ9UBR5 152 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 CD2P06729 351 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 CPN1P15169 458 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 HTR2CP28335 458 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 RABIFP47224 123 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 FBXO46Q6PJ61 603 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-207ENST00000612273 C12orf45Q8N5I9 185 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-207ENST00000612273 SLC6A7Q99884 636 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 MSRAQ9UJ68 235 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 LOC100289279A0A1B0GTE1 492 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 MFSD2BA6NFX1 497 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 PRAMEF26H0Y7S4 382 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF749O43361 778 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 DMWDQ09019 674 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 IL10RAQ13651 578 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 ZSCAN1Q8NBB4 408 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 TAS2R3Q9NYW6 316 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 LRP12Q9Y561 859 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 AUP1Q9Y679 476 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 WDFY4Q6ZS81 3184 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 SNRPGP15A8MWD9 76 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF736B4DX44 427 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 DCNP07585 359 aaKnown RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 PI3P19957 117 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 MRPS10P82664 201 aaKnown RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 RASGEF1BQ0VAM2 473 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 MANEAQ5SRI9 462 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 SLC18B1Q6NT16 456 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 LANCL3Q6ZV70 420 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 SCARB1Q8WTV0 552 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 PMM1Q92871 262 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 SEH1LQ96EE3 360 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 OR8B4Q96RC9 309 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 DUSP15Q9H1R2 295 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 MKL2Q9ULH7 1088 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 TMEM14AQ9Y6G1 99 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 PHF3Q92576 2039 aaKnown RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 NSA2O95478 260 aaKnown RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 GP1BBP13224 206 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 RIDAP52758 137 aaKnown RBP12.64□□□□□ -0.39
COL6A1-207ENST00000612273 CAPZA1P52907 286 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 SLC25A1P53007 311 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 YPEL5P62699 121 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 CLEC1AQ8NC01 280 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 OR6N1Q8NGY5 312 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 ST8SIA2Q92186 375 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 ARL5BQ96KC2 179 aa12.64□□□□□ -0.39
COL6A1-207ENST00000612273 SRPX2O60687 465 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-207ENST00000612273 IL5P05113 134 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 RORAP35398 523 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 PRKXP51817 358 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 OR7A5Q15622 319 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 RNF144BQ7Z419 303 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF679Q8IYX0 411 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 ASB5Q8WWX0 329 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 LCORQ96JN0 433 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-207ENST00000612273 TMEM269A0A1B0GVZ9 245 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 SLC17A2O00624 439 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 EFNA3P52797 238 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 OR4D6Q8NGJ1 314 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 OR1S1Q8NH92 325 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 FGGYQ96C11 551 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 WBP1Q96G27 269 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 C5orf34Q96MH7 638 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
COL6A1-207ENST00000612273 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 TRBV5-7A0A0A0MS05 114 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 LOC107986453A0A1B0GWG9 222 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 CLPSP04118 112 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 EID2Q8N6I1 236 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 SLC41A2Q96JW4 573 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 LRFN5Q96NI6 719 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-207ENST00000612273 SEC61A2Q9H9S3 476 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 EXOSC3Q9NQT5 275 aaKnown RBP12.63□□□□□ -0.39
COL6A1-207ENST00000612273 EMC3Q9P0I2 261 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 TMED7Q9Y3B3 224 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 RNF215Q9Y6U7 377 aa12.63□□□□□ -0.39
COL6A1-207ENST00000612273 DENND4AQ7Z401 1863 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms