RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 S1PR5Q9H228 398 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 C12orf4Q9NQ89 552 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 PILRAQ9UKJ1 303 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 PLPP2O43688 288 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 DBHP09172 617 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 FCGR2AP12318 317 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 MRPL49Q13405 166 aaKnown RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 ARL6IP1Q15041 203 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.9□□□□□ -0.5
TCF3-220ENST00000611869 NPSR1Q6W5P4 371 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 Q7L0L9 218 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 PIGQQ9BRB3 760 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 PTHLHP12272 177 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 MTCP1P56278 107 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 UBE2NP61088 152 aaKnown RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 IFITM3Q01628 133 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
TCF3-220ENST00000611869 OR51E1Q8TCB6 317 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 DHRS1Q96LJ7 313 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 SARGQ9BW04 601 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 BARHL1Q9BZE3 327 aa11.9□□□□□ -0.5
TCF3-220ENST00000611869 THSD7BQ9C0I4 1608 aa11.9□□□□□ -0.51
TCF3-220ENST00000611869 SIX6O95475 246 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 EGR3Q06889 387 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 IL10RAQ13651 578 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 WDR88Q6ZMY6 472 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 ADGRE4PQ86SQ3 457 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 UBALD2Q8IYN6 164 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 OR51S1Q8NGJ8 323 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 RAB3CQ96E17 227 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 B3GALT5Q9Y2C3 310 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 LIMS1P48059 325 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 CYB561P49447 251 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 FMODQ06828 376 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 BEX5Q5H9J7 111 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 OR52N5Q8NH56 324 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 FBLIM1Q8WUP2 373 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 PIGTQ969N2 578 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 TRMT61AQ96FX7 289 aaKnown RBP11.89□□□□□ -0.51
TCF3-220ENST00000611869 SEC22AQ96IW7 307 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 NIPAL2Q9H841 368 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 ACKR4Q9NPB9 350 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 CYSLTR2Q9NS75 346 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 KLK11Q9UBX7 282 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 IGHV3-15A0A0B4J1V0 119 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 ALG1L2C9J202 215 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 H7C417 338 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 CALCBP10092 127 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 THBS2P35442 1172 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 PMPCAQ10713 525 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 ELP2Q6IA86 826 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 COMTD1Q86VU5 262 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 UTP23Q9BRU9 249 aaKnown RBP11.89□□□□□ -0.51
TCF3-220ENST00000611869 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 SULT1B1O43704 296 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 PET100P0DJ07 73 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 PVALBP20472 110 aaPredicted RBP11.89□□□□□ -0.51
TCF3-220ENST00000611869 ENPP1P22413 925 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 RAP2BP61225 183 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 SORDQ00796 357 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 OR10G3Q8NGC4 313 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 WDFY2Q96P53 400 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 BANF2Q9H503 90 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 SLC5A6Q9Y289 635 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 TRAPPC4Q9Y296 219 aa11.89□□□□□ -0.51
TCF3-220ENST00000611869 TBX6O95947 436 aaPredicted RBP11.88□□□□□ -0.51
TCF3-220ENST00000611869 ACHEP22303 614 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 LCN10Q6JVE6 187 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 GLIPR1L1Q6UWM5 242 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 RAB11FIP2Q7L804 512 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 ZNF700Q9H0M5 742 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 EHFQ9NZC4 300 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 GPR171O14626 319 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 IGKV1D-16P01601 117 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 HOXB9P17482 250 aaPredicted RBP11.88□□□□□ -0.51
TCF3-220ENST00000611869 BLVRBP30043 206 aaPredicted RBP11.88□□□□□ -0.51
TCF3-220ENST00000611869 MAP2K6P52564 334 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 BTG1P62324 171 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 FUT7Q11130 342 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 CDK10Q15131 360 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 ZMYND11Q15326 602 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 PWWP2BQ6NUJ5 590 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 OR4K15Q8NH41 348 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 LILRB4Q8NHJ6 448 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 SPACA9Q96E40 222 aaPredicted RBP11.88□□□□□ -0.51
TCF3-220ENST00000611869 ZNF845Q96IR2 970 aaPredicted RBP11.88□□□□□ -0.51
TCF3-220ENST00000611869 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 COQ3Q9NZJ6 369 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 TRIM64A6NGJ6 449 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 DIRAS3O95661 229 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 SLC37A1P57057 533 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 ZNF85Q03923 595 aa11.88□□□□□ -0.51
TCF3-220ENST00000611869 DOC2BQ14184 412 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms