RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RALGAPA2Q2PPJ7 1873 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 FITM1A5D6W6 292 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 OR6C68A6NDL8 312 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 HMX3A6NHT5 357 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 TRAPPC2LH3BP13 241 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 KLK10O43240 276 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 UBL3O95164 117 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 AKR1C2P52895 323 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 MVDP53602 400 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 CLDN6P56747 220 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 FOXC1Q12948 553 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF141Q15928 474 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 UBE2NLQ5JXB2 153 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF684Q5T5D7 378 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 SMIM19Q96E16 107 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ARL5BQ96KC2 179 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ABHD6Q9BV23 337 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF700Q9H0M5 742 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF768Q9H5H4 540 aaKnown RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 RANBP3Q9H6Z4 567 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 FAM86C1Q9NVL1 165 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 SLCO1C1Q9NYB5 712 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 RABL2AQ9UBK7 228 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 PILRAQ9UKJ1 303 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 RABL2BQ9UNT1 228 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 HDGFL3Q9Y3E1 203 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 NAP1L6A6NFF2 107 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 TP53P04637 393 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 B4GALT1P15291 398 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 POU3F3P20264 500 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 UQCRC1P31930 480 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 SUMO3P55854 103 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 FUT7Q11130 342 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 EIF3IQ13347 325 aaKnown RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 CDK10Q15131 360 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 METAP1DQ6UB28 335 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 PGAP1Q75T13 922 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 TRAPPC6BQ86SZ2 158 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 VASH2Q86V25 355 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 SYS1Q8N2H4 156 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 SLC22A24Q8N4F4 322 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 CELF2-AS1Q8N7Q2 184 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ASCC1Q8N9N2 400 aaKnown RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 COQ8AQ8NI60 647 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 LIPHQ8WWY8 451 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 DVL3Q92997 716 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 RAB3CQ96E17 227 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 YIPF6Q96EC8 236 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 TMEM43Q9BTV4 400 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 DPCDQ9BVM2 203 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 C11orf54Q9H0W9 315 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 METTL9Q9H1A3 318 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 BANF2Q9H503 90 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ERVMER34-1Q9H9K5 563 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 ACKR4Q9NPB9 350 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 TAS2R4Q9NYW5 299 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 PIGLQ9Y2B2 252 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 PCDHGA3Q9Y5H0 932 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 NUBP2Q9Y5Y2 271 aa6.58□□□□□ -1.36
CSDE1-218ENST00000610726 SPTBN1Q01082 2364 aaKnown RBP6.58□□□□□ -1.36
CSDE1-218ENST00000610726 GOSR2O14653 212 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 OR1C1Q15619 314 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-218ENST00000610726 C6orf183Q5T699 404 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 METTL11BQ5VVY1 283 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 AGAP6Q5VW22 663 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 EIF5AL1Q6IS14 154 aaKnown RBP6.57□□□□□ -1.36
CSDE1-218ENST00000610726 LCN10Q6JVE6 187 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 Q6ZTK2 550 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 KIF18BQ86Y91 864 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 OR2Y1Q8NGV0 311 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 KCNG3Q8TAE7 436 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 PHYHIPQ92561 330 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 RASL10BQ96S79 203 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 CMSS1Q9BQ75 279 aaKnown RBP6.57□□□□□ -1.36
CSDE1-218ENST00000610726 LANCL2Q9NS86 450 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 RDH8Q9NYR8 311 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 SLCO1B1Q9Y6L6 691 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 LRRC37A2A6NM11 1700 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 SPAARA0A1B0GVQ0 90 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 B4DXG7 233 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 M0R135 149 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 DHHO43323 396 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 TFP02787 698 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 LIMS3P0CW19 117 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 LIMS4P0CW20 117 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 ELK1P19419 428 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 IDH3GP51553 393 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-218ENST00000610726 EFNA3P52797 238 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 DSCR4P56555 118 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-218ENST00000610726 TAS2R19P59542 299 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 IL13RA1P78552 427 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 RBPJQ06330 500 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 FZD5Q13467 585 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 TNK1Q13470 666 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 INSL4Q14641 139 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 CTF1Q16619 201 aa6.57□□□□□ -1.36
CSDE1-218ENST00000610726 PLEKHN1Q494U1 663 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-218ENST00000610726 OR10K2Q6IF99 312 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms