RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ZNF225Q9UK10 706 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 SCML1Q9UN30 329 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 NEU3Q9UQ49 428 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 POFUT2Q9Y2G5 429 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 KCNIP3Q9Y2W7 256 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 RBMX2Q9Y388 322 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 LRRC42Q9Y546 428 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 TDRD6O60522 2096 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 FRMPD3Q5JV73 1810 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 A0A1B0GUA9 196 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 RBMY1BA6NDE4 496 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 RBMY1EA6NEQ0 496 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 OR5B21A6NL26 309 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 C9JVG2 144 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TOM1O60784 492 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CIAO1O76071 339 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 SERPINE2P07093 398 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 RBMY1DP0C7P1 496 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 RBMY1A1P0DJD3 496 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TBPP20226 339 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CCNOP22674 350 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CMA1P23946 247 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 KIR3DL2P43630 455 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TGM4P49221 684 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CLDN18P56856 261 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 SIGLEC14Q08ET2 396 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ITGB3BPQ13352 177 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 UNC119Q13432 240 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ANGPT1Q15389 498 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TGFBIQ15582 683 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ALX1Q15699 326 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 VAMP3Q15836 100 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 DNAL1Q4LDG9 190 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CLVS2Q5SYC1 327 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 OR2A2Q6IF42 318 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 H3F3CQ6NXT2 135 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF530Q6P9A1 599 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 UQCC3Q6UW78 93 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ENPP6Q6UWR7 440 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF620Q6ZNG0 422 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC35D2Q76EJ3 337 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF546Q86UE3 836 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 PLA2G4DQ86XP0 818 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 STX12Q86Y82 276 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 NELFCDQ8IXH7 590 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 MKXQ8IYA7 352 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM71E2Q8N5Q1 922 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 OR4A15Q8NGL6 344 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 RHEBL1Q8TAI7 183 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 FCRL1Q96LA6 429 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TSSK3Q96PN8 268 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 API5Q9BZZ5 524 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 OR11A1Q9GZK7 315 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 ELOVL6Q9H5J4 265 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 SIAEQ9HAT2 523 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CCNB1IP1Q9NPC3 277 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CHRAC1Q9NRG0 131 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 MRPL22Q9NWU5 206 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 GIN1Q9NXP7 522 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC2A8Q9NY64 477 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 NKIRAS1Q9NYS0 192 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 TAS2R7Q9NYW3 318 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CLEC2DQ9UHP7 191 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 CSDC2Q9Y534 153 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 MROH7-TTC4A0A0A0MT08 1334 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 MAP3K5Q99683 1374 aa2.85□□□□□ -1.95
SMCHD1-213ENST00000609587 MEGF6O75095 1541 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 SCRIBQ14160 1630 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 A0A0G2JLM5 398 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 TRBV11-1A0A0K0K1C0 115 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CCDC182A6NF36 153 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF99A8MXY4 864 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CENPBD1B2RD01 187 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 COCHO43405 550 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CYTH3O43739 400 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 TNFSF13O75888 250 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 FTH1P02794 183 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 DCNP07585 359 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CTXN2P0C2S0 81 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 MLNP12872 115 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 GSTM3P21266 225 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 MDKP21741 143 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CFL1P23528 166 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CD1CP29017 333 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 GTF2A1P52655 376 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 RGS8P57771 180 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTBP60709 375 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTA2P62736 377 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTG1P63261 375 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTG2P63267 376 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTC1P68032 377 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTA1P68133 377 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 SCRN3Q0VDG4 424 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 BST2Q10589 180 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 MPPED2Q15777 294 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF658BQ4V348 819 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 TTMPQ5BVD1 217 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CTRB2Q6GPI1 263 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms