RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 ING3Q9NXR8 418 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 CISD1Q9NZ45 108 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 EXOSC1Q9Y3B2 195 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 AKAP6Q13023 2319 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 POLEQ07864 2286 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 OR6C6A6NF89 314 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LIPT2A6NK58 231 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 H7C1C5 153 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ABCD4O14678 606 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SYT7O43581 403 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 DHFRP00374 187 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 CELP19835 753 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 MAPK3P27361 379 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LAP3P28838 519 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LGALS4P56470 323 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PRSS12P56730 875 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LCN6P62502 163 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ACTA2P62736 377 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 GRB2P62993 217 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ACTG2P63267 376 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SLC35A2P78381 396 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 Q0VFX4 171 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 TOMM34Q15785 309 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ZNF239Q16600 458 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PGGHGQ32M88 737 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SYT6Q5T7P8 510 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PAMR1Q6UXH9 720 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 USP51Q70EK9 711 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 FGD2Q7Z6J4 655 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 TMEM179BQ7Z7N9 219 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 MEX3DQ86XN8 651 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 NKAIN4Q8IVV8 208 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 MSRB3Q8IXL7 192 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 MKXQ8IYA7 352 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ACBD7Q8N6N7 88 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 TRMT10AQ8TBZ6 339 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PIGCQ92535 297 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ZMYND19Q96E35 227 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 KTI12Q96EK9 354 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 BARD1Q99728 777 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 GAL3ST1Q99999 423 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 TMED9Q9BVK6 235 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 DUSP21Q9H596 190 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SLC6A13Q9NSD5 602 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ADAM18Q9Y3Q7 739 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 COL4A3Q01955 1670 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PKDREJQ9NTG1 2253 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ANKRD11Q6UB99 2663 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SMIM30A4D0T7 59 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 NKX2-6A6NCS4 301 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 GABARAPO95166 117 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PAHP00439 452 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LPLP06858 475 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 CELA3AP09093 270 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 FPR3P25089 353 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 TIMP3P35625 211 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 GABRA2P47869 451 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 KLF3P57682 345 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 RAB14P61106 215 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 HNRNPA0Q13151 305 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SKP2Q13309 424 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 OR8G1Q15617 311 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 NDUFA5Q16718 116 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PRR30Q53SZ7 412 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 NUFIP2Q7Z417 695 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 TRAPPC6BQ86SZ2 158 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LHFPL3Q86UP9 236 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 CALHM3Q86XJ0 350 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ADGRG3Q86Y34 549 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LRRC17Q8N6Y2 441 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 OR6Q1Q8NGQ2 317 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 LILRB4Q8NHJ6 448 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 RHOXF1Q8NHV9 184 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PSMF1Q92530 271 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SGCDQ92629 289 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 C11orf24Q96F05 449 aaPredicted RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 ELMOD3Q96FG2 381 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 FOXN4Q96NZ1 517 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 MNTQ99583 582 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 SIAEQ9HAT2 523 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 CNOT2Q9NZN8 540 aaKnown RBP4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 PSORS1C1Q9UIG5 152 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 CCL27Q9Y4X3 112 aa4.6□□□□□ -1.67
SCARNA15-201ENST00000607520 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 A0A1W2PNV4 684 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 A0A1W2PRQ8 180 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 AQP7P3A6NL99 342 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 PSMD9O00233 223 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 DLGAP1O14490 977 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 ENTPD6O75354 484 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 HRGP04196 525 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 ZNF35P13682 527 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 PRF1P14222 555 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 C4BPBP20851 252 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 SDHAP31040 664 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 OMPP47874 163 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 MTNR1AP48039 350 aa4.59□□□□□ -1.67
SCARNA15-201ENST00000607520 RAB25P57735 213 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms