RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 A8MV72 311 aaPredicted RBP10.52□□□□□ -0.73
CTSA-210ENST00000606000 NDUFS8O00217 210 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 DCTN6O00399 190 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 TLX2O43763 284 aaPredicted RBP10.52□□□□□ -0.73
CTSA-210ENST00000606000 OR10H3O60404 316 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 SLC16A7O60669 478 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 NGFP01138 241 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 CDKN2AP42771 156 aaKnown RBP10.52□□□□□ -0.73
CTSA-210ENST00000606000 EVX1P49640 407 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 MS4A2Q01362 244 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 HNRNPA0Q13151 305 aaKnown RBP10.52□□□□□ -0.73
CTSA-210ENST00000606000 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 ZNF786Q8N393 782 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 OR1J2Q8NGS2 313 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 SYNPRQ8TBG9 265 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 UBASH3BQ8TF42 649 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 YIPF5Q969M3 257 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 FN3KQ9H479 309 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 VNN3Q9NY84 501 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 TAAR3PQ9P1P4 343 aa10.52□□□□□ -0.73
CTSA-210ENST00000606000 COA3Q9Y2R0 106 aaPredicted RBP10.52□□□□□ -0.73
CTSA-210ENST00000606000 SETD2Q9BYW2 2564 aaPredicted RBP10.52□□□□□ -0.73
CTSA-210ENST00000606000 ZANQ9Y493 2812 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 DOK2O60496 412 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 PTHP01270 115 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 ERCC1P07992 297 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 APEHP13798 732 aaKnown RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 ZNF250P15622 560 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 COL8A2P25067 703 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 FPR3P25089 353 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 GSSP48637 474 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 GDI2P50395 445 aaKnown RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 KLF3P57682 345 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 RIN1Q13671 783 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 MEP1BQ16820 701 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 NKPD1Q17RQ9 610 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 PGBD2Q6P3X8 592 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 DPY19L2P2Q6ZN68 376 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 ABHD4Q8TB40 342 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 SLC25A40Q8TBP6 338 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 IPCEF1Q8WWN9 437 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 C11orf40Q8WZ69 217 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 SLC7A6Q92536 515 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 CCDC124Q96CT7 223 aaKnown RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 SAMD8Q96LT4 415 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 ERMAPQ96PL5 475 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 BTBD10Q9BSF8 475 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 OR2J1Q9GZK6 312 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 NDEL1Q9GZM8 345 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 NUAK2Q9H093 628 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 LRMDAQ9H2I8 198 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 MS4A5Q9H3V2 200 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 POFUT1Q9H488 388 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 EGLN3Q9H6Z9 239 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 KRCC1Q9NPI7 259 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 VSX1Q9NZR4 365 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 ACTR3BQ9P1U1 418 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 TIMM10BQ9Y5J6 103 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 LYVE1Q9Y5Y7 322 aa10.51□□□□□ -0.73
CTSA-210ENST00000606000 NSD1Q96L73 2696 aaPredicted RBP10.51□□□□□ -0.73
CTSA-210ENST00000606000 C12orf71A8MTZ7 269 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 WNT9BO14905 357 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 LILRA1O75019 489 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 KHDRBS3O75525 346 aaKnown RBP10.5□□□□□ -0.73
CTSA-210ENST00000606000 TXNDC12O95881 172 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 HIST1H1CP16403 213 aaKnown RBP10.5□□□□□ -0.73
CTSA-210ENST00000606000 ZNF23P17027 643 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 CALB2P22676 271 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 GIFP27352 417 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 RBMXP38159 391 aaKnown RBP10.5□□□□□ -0.73
CTSA-210ENST00000606000 RAD52P43351 418 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 RPS6KA3P51812 740 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 SMIM11AP58511 58 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 RFX4Q33E94 735 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 SPATS1Q496A3 300 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 CYB5R2Q6BCY4 276 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 GPR139Q6DWJ6 353 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 LCN8Q6JVE9 175 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 LEG1Q6P5S2 330 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 ZNF620Q6ZNG0 422 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 IL17RELQ6ZVW7 336 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 SDR9C7Q8NEX9 313 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 OR4C15Q8NGM1 316 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 OR4K13Q8NH42 304 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 MSI2Q96DH6 328 aaKnown RBP10.5□□□□□ -0.73
CTSA-210ENST00000606000 MARS2Q96GW9 593 aaKnown RBP10.5□□□□□ -0.73
CTSA-210ENST00000606000 SNX18Q96RF0 628 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 NMNAT3Q96T66 252 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 PLA2G12AQ9BZM1 189 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 BCL2L14Q9BZR8 327 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 NARFLQ9H6Q4 476 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 CHODLQ9H9P2 273 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 ASH2LQ9UBL3 628 aa10.5□□□□□ -0.73
CTSA-210ENST00000606000 FBXO9Q9UK97 447 aaPredicted RBP10.5□□□□□ -0.73
CTSA-210ENST00000606000 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
CTSA-210ENST00000606000 ZSCAN5BA6NJL1 495 aa10.49□□□□□ -0.73
CTSA-210ENST00000606000 C17orf100A8MU93 164 aa10.49□□□□□ -0.73
CTSA-210ENST00000606000 TNFRSF11BO00300 401 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms