RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 MMP16P51512 607 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ERVK-25P63136 954 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 MRPS34P82930 218 aaKnown RBP12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RGNQ15493 299 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SGCAQ16586 387 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 GTDC1Q4AE62 458 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 C6orf10Q5SRN2 563 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 OGFOD2Q6N063 350 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 Q6ZSV7 163 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 KRT73Q86Y46 540 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 KIRREL3Q8IZU9 778 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZSCAN4Q8NAM6 433 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NOXO1Q8NFA2 376 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 LRTOMTQ8WZ04 291 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SGCDQ92629 289 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 VPS33AQ96AX1 596 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TRIM15Q9C019 465 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 DPAGT1Q9H3H5 408 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RAD21L1Q9H4I0 556 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TMEM165Q9HC07 324 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 GCM1Q9NP62 436 aa12.82□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 A0A1W2PRG6 482 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 P2RY10O00398 339 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TOX4O94842 621 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CYB5R3P00387 301 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CDAP32320 146 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PSG4Q00888 419 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 HIST3H3Q16695 136 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 DHRS7BQ6IAN0 325 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 DHRS4L2Q6PKH6 230 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 Q6ZTK2 550 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 HDDC2Q7Z4H3 204 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SCCPDHQ8NBX0 429 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ITCHQ96J02 903 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 C16orf45Q96MC5 204 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 C16orf95Q9H693 158 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 MEAF6Q9HAF1 191 aa12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 WDR91A4D1P6 747 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PRORSD1PA6NEY8 169 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 BLOC1S5-TXNDC5H3BN57 136 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TPST1O60507 370 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ABHD16AO95870 558 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SERPINE1P05121 402 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 IER3P46695 156 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 FADDQ13158 208 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF74Q16587 644 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RUNDC3AQ59EK9 446 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 C10orf128Q5T292 105 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 HHATQ5VTY9 493 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 Q6ZR03 302 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NANOGNBQ7Z5D8 188 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 COMTD1Q86VU5 262 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ATG16L2Q8NAA4 619 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NPEPL1Q8NDH3 523 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF420Q8TAQ5 688 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PKNOX2Q96KN3 472 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 OR2H1Q9GZK4 316 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 RYR3Q15413 4870 aa12.8□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CENPVL3A0A0U1RRI6 287 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 BTBD17A6NE02 478 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 LRRC30A6NM36 301 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CENPBD1B2RD01 187 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 PHYHO14832 338 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ICMTO60725 284 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 FMO6PO60774 539 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SLC2A10O95528 541 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SFTPBP07988 381 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 FUT4P22083 530 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TUBG1P23258 451 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CFHR2P36980 270 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 GUCA1AP43080 201 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 EGR3Q06889 387 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF404Q494X3 552 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TTC33Q6PID6 262 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NFKBIDQ8NI38 313 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NSMAFQ92636 917 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CMBLQ96DG6 245 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF607Q96SK3 696 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CDADC1Q9BWV3 514 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 MRPL13Q9BYD1 178 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SLCO1B3Q9NPD5 702 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TUBG2Q9NRH3 451 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 STX18Q9P2W9 335 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF229Q9UJW7 825 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 NDRG4Q9ULP0 352 aaKnown RBP12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TIMM10BQ9Y5J6 103 aa12.79□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF816-ZNF321PA0A0X1KG74 233 aa12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 ZNF879B4DU55 563 aa12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CLIC1O00299 241 aa12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 KPNA4O00629 521 aaPredicted RBP12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 CHP2O43745 196 aa12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 TRMUO75648 421 aaKnown RBP12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 SLC22A3O75751 556 aa12.78□□□□□ -0.36
NEDD8-MDP1-204ENST00000605847 LIPFP07098 398 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms