RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TIMP3P35625 211 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 LIPAP38571 399 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 GBX2P52951 348 aaPredicted RBP19.88■□□□□ 0.77
IRF3-228ENST00000601291 FAPQ12884 760 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 NRN1LQ496H8 165 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 FAM27BQ5VT28 67 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 GPR107Q5VW38 600 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 FBXW9Q5XUX1 488 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 SEM1Q6ZVN7 128 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 CLVS1Q8IUQ0 354 aaPredicted RBP19.88■□□□□ 0.77
IRF3-228ENST00000601291 HAVCR2Q8TDQ0 301 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 HTRA1Q92743 480 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 UFD1Q92890 307 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 ZNF416Q9BWM5 594 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 MROQ9BYG7 248 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 C1orf198Q9H425 327 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 ASH2LQ9UBL3 628 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 PRSS50Q9UI38 385 aa19.88■□□□□ 0.77
IRF3-228ENST00000601291 ATMQ13315 3056 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 NOL3O60936 208 aaKnown RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 FARS2O95363 451 aaKnown RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 CD36P16671 472 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 KIR2DL2P43627 348 aaPredicted RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 RGS6P49758 472 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 MRPL28Q13084 256 aaKnown RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 DOC2BQ14184 412 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 ZNF684Q5T5D7 378 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 PCSK4Q6UW60 755 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 KRT77Q7Z794 578 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 DOLPP1Q86YN1 238 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 YIPF7Q8N8F6 280 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 YIPF6Q96EC8 236 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 OR8B4Q96RC9 309 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 AMELYQ99218 206 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 LHFPL6Q9Y693 200 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 HSPB2A8KAH6 182 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 H3BSA7 217 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 PSMD9O00233 223 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 MAGEB4O15481 346 aaPredicted RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 TMIGD3P0DMS9 266 aaPredicted RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 OR8G3PP0DMU2 310 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 B4GALT1P15291 398 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 ROM1Q03395 351 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 AQP6Q13520 282 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 HSPB2Q16082 182 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 CORO6Q6QEF8 472 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 TFAP2EQ6VUC0 442 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 ATCAYQ86WG3 371 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 ZNF679Q8IYX0 411 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 ST7LQ8TDW4 575 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 PELI1Q96FA3 418 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 FUNDC2Q9BWH2 189 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 RBM38Q9H0Z9 239 aaKnown RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 ACOXLQ9NUZ1 547 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 MRM2Q9UI43 246 aaKnown RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 GDF2Q9UK05 429 aaPredicted RBP19.87■□□□□ 0.77
IRF3-228ENST00000601291 CEPT1Q9Y6K0 416 aa19.87■□□□□ 0.77
IRF3-228ENST00000601291 PRR32B1ATL7 298 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 CNOT4O95628 575 aaKnown RBP19.86■□□□□ 0.77
IRF3-228ENST00000601291 LALBAP00709 142 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 CPEP16870 476 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 ENDOGQ14249 297 aaKnown RBP19.86■□□□□ 0.77
IRF3-228ENST00000601291 ST3GAL2Q16842 350 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 C3P1Q6ZMU1 363 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 ZNF813Q6ZN06 617 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 P2RY8Q86VZ1 359 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 LRRC18Q8N456 261 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 SLC22A24Q8N4F4 322 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 CNTNAP3BQ96NU0 1288 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 CNTNAP3Q9BZ76 1288 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 KCNN2Q9H2S1 579 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 SLCO1C1Q9NYB5 712 aa19.86■□□□□ 0.77
IRF3-228ENST00000601291 TOXO94900 526 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 CST2P09228 141 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 MPGP29372 298 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 TGFBR2P37173 567 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 SH3BGRP55822 239 aaPredicted RBP19.85■□□□□ 0.77
IRF3-228ENST00000601291 ARF1P84077 181 aaKnown RBP19.85■□□□□ 0.77
IRF3-228ENST00000601291 FOXF2Q12947 444 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 TPBGQ13641 420 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 LIPKQ5VXJ0 399 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 LRRN1Q6UXK5 716 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 ST6GALNAC3Q8NDV1 305 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 ZNF420Q8TAQ5 688 aaPredicted RBP19.85■□□□□ 0.77
IRF3-228ENST00000601291 RNF133Q8WVZ7 376 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 SLAMF6Q96DU3 332 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 PROCRQ9UNN8 238 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 BOD1L1Q8NFC6 3051 aa19.85■□□□□ 0.77
IRF3-228ENST00000601291 ZNF254O75437 659 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 ABHD16AO95870 558 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 RIDAP52758 137 aaKnown RBP19.84■□□□□ 0.77
IRF3-228ENST00000601291 SSX1Q16384 188 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 CCDC58Q4VC31 144 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 C9orf135Q5VTT2 229 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 VWA1Q6PCB0 445 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 DEGS2Q6QHC5 323 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 SPATC1Q76KD6 591 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 ZNF627Q7L945 461 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 PHC2Q8IXK0 858 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 RPRMLQ8N4K4 120 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms