RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 OR2H1Q9GZK4 316 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 EGLN1Q9GZT9 426 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 POFUT1Q9H488 388 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SMURF2Q9HAU4 748 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 TMEM165Q9HC07 324 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 CYSLTR2Q9NS75 346 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SELENONQ9NZV5 590 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 IGHV3OR16-10A0A075B7F0 116 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 KIR2DS1A0A191URI9 304 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 A0A1B0GUS0 222 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 MDFIC2A0A1B0GVS7 189 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 PLSCR5A0PG75 271 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 TMEM120BA0PK00 339 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 TRAPPC13A5PLN9 417 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 FAM181BA6NEQ2 426 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 NPIPB13A6NJU9 1138 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CEACAM18A8MTB9 384 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 NPIPB4C9JG80 1138 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 BLOC1S5-TXNDC5H3BN57 136 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 OR7A10O76100 309 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 FSTL3O95633 263 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 GPANK1O95872 356 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 IGF2P01344 180 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 MT-ND1P03886 318 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 OPN1SWP03999 348 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 HIST1H2ABP04908 130 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CST2P09228 141 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 THRBP10828 461 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 KITLGP21583 273 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CPT2P23786 658 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 LAP3P28838 519 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 PMELP40967 661 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 IDH3AP50213 366 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 GDI2P50395 445 aaKnown RBP5.11□□□□□ -1.59
VRK3-220ENST00000600259 ZNF84P51523 738 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CLRN1P58418 232 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 NCALDP61601 193 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 BTG1P62324 171 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ERVK-25P63136 954 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 TNFAIP6P98066 277 aaPredicted RBP5.11□□□□□ -1.59
VRK3-220ENST00000600259 FMODQ06828 376 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 FHL1Q13642 323 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 SELPLGQ14242 412 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ENDOGQ14249 297 aaKnown RBP5.11□□□□□ -1.59
VRK3-220ENST00000600259 SGCAQ16586 387 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 DEFB112Q30KQ8 113 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ARMCX4Q5H9R4 360 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 MTX3Q5HYI7 312 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CEP85LQ5SZL2 805 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ASPHD2Q6ICH7 369 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ZNF841Q6ZN19 808 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 HIST3H2AQ7L7L0 130 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 NKAIN4Q8IVV8 208 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 PARP8Q8N3A8 854 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 KLHL36Q8N4N3 616 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 SPICQ8N5J4 248 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CLDN22Q8N7P3 220 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 LRRC75AQ8NAA5 344 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 OR52E2Q8NGJ4 325 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ITLN1Q8WWA0 313 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 RAB40AQ8WXH6 277 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 HIST1H2ACQ93077 130 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 TAMM41Q96BW9 452 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 HAVCR1Q96D42 359 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 CMBLQ96DG6 245 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 C4orf45Q96LM5 186 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 MRI1Q9BV20 369 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 MS4A7Q9GZW8 240 aaPredicted RBP5.11□□□□□ -1.59
VRK3-220ENST00000600259 NANOGQ9H9S0 305 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 INIPQ9NRY2 104 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 C20orf141Q9NUB4 165 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 TBCCD1Q9NVR7 557 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 C1RLQ9NZP8 487 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 EIF3KQ9UBQ5 218 aaKnown RBP5.11□□□□□ -1.59
VRK3-220ENST00000600259 CGGBP1Q9UFW8 167 aaPredicted RBP5.11□□□□□ -1.59
VRK3-220ENST00000600259 IL19Q9UHD0 177 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 SLC7A7Q9UM01 511 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 ZNF281Q9Y2X9 895 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 STARD10Q9Y365 291 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 TIMM10BQ9Y5J6 103 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 USH1CQ9Y6N9 552 aa5.11□□□□□ -1.59
VRK3-220ENST00000600259 IGHV2-70DA0A0C4DH43 119 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 A0A1B0GWJ7 208 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 A0A1W2PRG6 482 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 EVPLLA8MZ36 301 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 SRRM5B3KS81 715 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 KPNA4O00629 521 aaPredicted RBP5.1□□□□□ -1.59
VRK3-220ENST00000600259 HOXA3O43365 443 aaPredicted RBP5.1□□□□□ -1.59
VRK3-220ENST00000600259 NDUFA7O95182 113 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 TGDSO95455 350 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 COX5BP10606 129 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 SELEP16581 610 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 FUT4P22083 530 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 MDH2P40926 338 aaKnown RBP5.1□□□□□ -1.59
VRK3-220ENST00000600259 MTNR1AP48039 350 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 ERFP50548 548 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 ESCO2Q56NI9 601 aa5.1□□□□□ -1.59
VRK3-220ENST00000600259 ZNF362Q5T0B9 420 aaPredicted RBP5.1□□□□□ -1.59
VRK3-220ENST00000600259 OLFML2AQ68BL7 652 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms